KEGG   Geobacter bemidjiensis: Gbem_3644Help
Entry
Gbem_3644         CDS       T00749                                 

Gene name
gatA
Definition
(GenBank) aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
  KO
K02433  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Organism
gbm  Geobacter bemidjiensis
Pathway
gbm00970  Aminoacyl-tRNA biosynthesis
gbm01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gbm00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Gbem_3644 (gatA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:gbm03029]
    Gbem_3644 (gatA)
Enzymes [BR:gbm01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     Gbem_3644 (gatA)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     Gbem_3644 (gatA)
Mitochondrial biogenesis [BR:gbm03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    Gbem_3644 (gatA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Amidase
Motif
Other DBs
NCBI-ProteinID: ACH40636
UniProt: B5ED19
LinkDB All DBs
Position
4167914..4169371
Genome map
AA seq 485 aa AA seqDB search
MEIFDLTIHELHEKLKAKEVSSVEATRAMLDRIEAVDSQVNAYITVTPEQALVQAEDADR
RIAAGEIAPLTGIPVGLKDIFVTKGIRTTCGSRILENFVPPYDGTAVAKLKEQGAVIVGK
LNQDEFAMGSSNESSYFGPCKNPWDLSCTPGGSSGGSAAAIAARTATATLGTDTGGSIRQ
PASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPLTRDVTDSALLLGAVAGYDPMDSTSV
NTPVPDYVASLAKGVKGIKIGLPKQYFIEGLDPDVKRAMDEAIAMYKSLGADIREVSLPN
TEYAVATYYIIATAEASANLARYDGVRFGHRAEDARGLAQMYSKSRAEGFGPEVKRRIML
GTYALSSGYYDAYYVKAQKVRTLIQQDFLNAFKEVDVLLTPIAPTPAFKIAEKLEDPLQM
YLSDIFTIPVNLAGTCGISVPAGFSAAGLPIGLQLVGKPFGEQEILTAAYSFERETQWHL
KKAPL
NT seq 1458 nt NT seq  +upstreamnt  +downstreamnt
atggaaattttcgacctaaccatacacgagctgcatgagaagctgaaggcgaaggaggtc
tcttccgtcgaggcgacccgcgccatgctggaccggatcgaggcggtggacagccaggtg
aacgcctacatcaccgtgaccccggagcaggcgctggtacaggctgaggacgcggaccgc
cgcatcgccgctggcgaaatcgcgcctctgaccggcatcccggtcggcctcaaggacata
ttcgtcaccaagggaatccgcaccacctgcggctcgcgcatcctggaaaacttcgtcccc
ccctacgacggcacagcggtagcaaagcttaaagagcagggcgcggtcatcgtcggcaag
ctgaaccaggacgagttcgccatgggctcctccaacgagtcgagctacttcggcccctgc
aagaacccgtgggatctttcctgcacgccgggcggctcctccgggggctccgccgccgcc
atcgccgcacgcaccgcgaccgcgacgctcggaaccgataccggcggctcgatacgccaa
ccggcctcgcactgcggctgcgtgggcctgaagccgacctacggcagggtctcccgctac
ggcgtcatcgcttacgcctcctcgctggatcaggtaggcccgctcacccgcgacgttacc
gactcggcactccttttgggagcggtggcaggttacgacccgatggattccacctcggtc
aacaccccggtccccgactacgtcgcctccctcgccaaaggcgtaaagggtataaagatc
ggccttcccaagcagtacttcatcgagggtctcgacccggacgtgaagcgcgccatggac
gaggcgatcgccatgtacaagagcctcggcgccgacattcgtgaagtgagcctccccaac
accgagtacgccgtcgccacctactacatcatcgccaccgcagaggctagcgccaacttg
gcccgctacgacggcgtccgcttcgggcaccgcgcagaggatgccaggggcctggcgcag
atgtactccaagagccgcgccgaggggttcggccccgaggttaagcgccgcatcatgttg
ggaacctacgccctttcctccggctactacgacgcctactacgtcaaggcgcagaaggtg
cgcaccctgatccagcaggacttcctgaacgcctttaaggaagtcgacgtgctgttgacc
ccgatagcgcccaccccggccttcaagatcgcggaaaagctcgaggacccgctgcagatg
tacctctccgacatcttcaccattccggtgaacctggccggaacctgcggcatctccgtt
cccgccgggttcagcgccgcaggacttcccatcgggctgcaactggtagggaaaccgttc
ggcgagcaggaaatcctcaccgccgcgtactccttcgaaagggagacgcagtggcacctg
aagaaggcgccgctgtaa

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