KEGG   Geobacter bemidjiensis: Gbem_3645Help
Entry
Gbem_3645         CDS       T00749                                 

Gene name
gatB
Definition
(GenBank) aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
gbm  Geobacter bemidjiensis
Pathway
gbm00970  Aminoacyl-tRNA biosynthesis
gbm01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gbm00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Gbem_3645 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:gbm03029]
    Gbem_3645 (gatB)
Enzymes [BR:gbm01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     Gbem_3645 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     Gbem_3645 (gatB)
Mitochondrial biogenesis [BR:gbm03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    Gbem_3645 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey
Motif
Other DBs
NCBI-ProteinID: ACH40637
UniProt: B5ED20
LinkDB All DBs
Position
4169547..4171013
Genome map
AA seq 488 aa AA seqDB search
MKYQVVIGLEVHTQLTTNTKIFCGCSTRFGAEPNSQTCPVCLGLPGALPVLNQQVVEYAI
RAGLATNCSITKRNVFARKNYFYPDLPKGYQISQFDLPICQHGHLDIEVEGEKKRIGITR
IHMEEDAGKLVHADIPGVDDSCVDLNRACTPLLEIVSEPDMRSPDEAIAYLKKLHQIVMY
LGICDGNLEEGSFRCDANVSLMPVGSNVFGTRAELKNINSFKFIKQAIEYEIERQAEILD
DGGKVVQETRLFDPNTGTTRSMRGKEEAHDYRYFPDPDLVPVIISDDWIEKVRGGLPELP
EAKRARFMSEGGAVFGGSAFGLPEYDAEVLVASRELAQYFEDTVALFPQAKTVSNWVMGE
VTRALNDDNNRSIAECPVTPALLADLLKLMEKGTISGKIAKTVFDEMYKTGKASEKIVEE
KGLVQVSDTGAIEAMVDEVLEKNPGQVAEYRGGKETLFGFFVGQVMRASKGKANPAVVNE
LLLKKLNS
NT seq 1467 nt NT seq  +upstreamnt  +downstreamnt
atgaaatatcaggtcgtcatcgggctcgaggtccacacccagctcaccaccaacaccaag
atcttctgcggctgctcgacccgcttcggggcggagccgaactcccagacctgcccggtc
tgcctcggcttaccaggcgcgctcccggtactgaaccagcaggtggtggaatacgccatc
cgcgccggactcgccaccaactgctccatcaccaaaaggaacgtcttcgcccggaaaaac
tacttctaccctgacctcccgaagggttaccagatcagccagttcgacctccccatctgc
cagcacggccacctggacatcgaggtggagggcgaaaagaaacggatcgggatcacccgc
atccacatggaggaggacgccggcaagttggtgcacgctgacatccccggggtggacgat
tcctgcgtcgacctgaaccgcgcctgcacgccgctactggagatcgtctcggagccggac
atgcgctccccggacgaggcaatcgcctacctgaagaagctgcaccagatcgtcatgtat
ctggggatctgcgacggcaacctggaggaagggagcttccgctgcgacgcgaacgtatcg
ctcatgccggtcggctccaacgtcttcggcacccgcgcggaactgaagaacatcaactcc
ttcaagttcatcaagcaggcaatcgagtacgagattgagcgccaggccgagatcctcgac
gacggcggcaaggtggtccaggaaacccgacttttcgacccgaacaccggcaccacccgc
tccatgcgcggcaaggaggaggcgcacgactaccgctacttcccggaccccgacctggtc
ccggtgatcatctcggacgactggatcgagaaggtgcgcggcgggctgcccgagcttccc
gaggcgaagcgcgcgcgcttcatgtcggaaggaggggccgtatttggcggctctgcattc
ggactccccgagtacgacgccgaggtcctggtggcaagccgcgagctggcgcagtacttc
gaggacacggtcgcgctcttcccgcaggccaagaccgtctccaactgggtcatgggcgaa
gtcacccgcgccctcaacgacgacaacaaccgctccatcgccgagtgcccggtcaccccg
gctctcttggccgacctcctgaagctgatggagaaagggaccatctccggcaagatcgcc
aagaccgtcttcgacgagatgtacaagaccggcaaggcgtcggagaagatcgtcgaggag
aagggtctggtgcaggtctccgacaccggagccatcgaggccatggtggacgaggtgctg
gagaagaaccccgggcaggtagccgagtacaggggtggcaaagagacccttttcggcttc
ttcgtgggccaagtcatgcgcgcctccaaagggaaggcgaaccccgccgtcgtaaacgaa
ctgctgctaaagaaactcaacagctaa

DBGET integrated database retrieval system