Citrifermentans bremense: GEOBRER4_26850
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Entry
GEOBRER4_26850 CDS
T07006
Name
(GenBank) DNA helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
gbn
Citrifermentans bremense
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbn03400
]
GEOBRER4_26850
Enzymes [BR:
gbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GEOBRER4_26850
DNA repair and recombination proteins [BR:
gbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GEOBRER4_26850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BCG47935
UniProt:
A0A6S6M900
LinkDB
All DBs
Position
complement(3107566..3110715)
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AA seq
1049 aa
AA seq
DB search
MAIPPLTIIPAGAGSGKTYTLQKTLAEWVGKGWVEPDRIVAVTFTEAAAGELKDRIREEL
VSRGRLDDALKLERSYISTIHGFGLRVLSEFAFDAGLSPAPRLLNEDEEAVLIRTALAAA
DRAEDVLGNLAAYGYRYNFNTGTGAEDQFKERVLQLIAKLRSIGRLEEDPRITPHALKMV
ERVYGQTAQAKPLKEALQRAVTALLQAFPKSLVPLFTGNKTAEKEFREDFLALARASNPE
NLDQDWQTWQRLRQLRLSKRGAQTPSGYDALAEAVMAAAEALPTHPGPREQAMKHVEGLL
EVSQECLNRYAAGKRVKGLVDYSDMLAISQRLLAQRPDVLEELKTRVDCLVIDEFQDTNP
LQFALVWALFSSGVPAVIVGDLKQAIMGFQNADPRLLENLAARNDTKPLTGNWRSTPKVM
KWVNQVGKGLFGDAYTELAPMADYPSHQTALEVMDFEEGPYRGSTRIPAQYMALRIRDLL
ADDKQKIYDKRLKKERRIRGGDVAVLCPIKERLERYAEALRQLGIKTRMDEDGWFDSRPV
QIAFHALSYLADPSDRHAALYLAVTELGVHDLQSAVAELLDGRKLDDPVLARLDALVPSS
VEATVTELVASALEALDLYGVCSSWPDAASARANLLRLQGEAAEFQGANVEALVSGRYYG
SGLKTFLAWLRGKVERDNKQPAPRVLDEDAVVLTTWHSSKGREWPVVAVCATDTEVYSRF
PEMSVVYDDFDNLAAVLDKARMEISPAFVAPETQERFAEPLMPELRESAVRLIYVAITRA
REKVILECRRYQEPEKCSYWTILQQAGRVEIDGNKMIVLGEKFDCRVVQCGKHAPEGFED
ETSQGAKELPSFGRRAIRPGAVYCKLTPEVVTPSSQHGAEAGRIITIAYGEPLRVDLEIK
GFDRGTFLHRCFEASVDTPDRLQLVADSLGVMLSEAGRVAIGVGIEAFRTWLKDSLVAER
GHVEVPILAQNKEGSVVAGSIDLLVETPAGLWIVDHKSDQSEEFDRLFAFYRPQLEVYRE
AVYSLWPDKKVLGLVINWVSHGKVSMSEL
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggccataccgccgcttactatcatcccggcgggagccggatcggggaagacctatacg
ctacagaaaaccttggcggagtgggtgggcaagggatgggtagaaccggatcgcattgtg
gcagtaacgtttactgaagccgcagccggggagctgaaggaccgcattcgcgaggaactg
gtctcgcgggggcggcttgatgacgctctcaagctagagcgctcctatatctccaccatc
catggcttcggtcttagggtgctcagtgaattcgccttcgatgccgggctctctccggcg
ccgcgtctcttgaatgaggacgaggaggcggttctgatacgcacggctcttgcggcagcc
gaccgagcggaggatgtgctggggaaccttgccgcctacggctaccgttacaacttcaac
accggtaccggtgctgaggatcagttcaaagagcgggtgctgcaactgatagcgaagctt
cgctccatagggcgtttggaggaggatccccggatcacgccgcatgcgctgaagatggtc
gagagggtatacgggcagacggcgcaggccaagcctctcaaggaggcgctgcaacgggcg
gtgacggccctcctgcaagcctttcccaagagcctcgttcctctttttaccgggaacaag
acagctgaaaaggagtttcgggaggacttcctggctctggcccgcgcctccaatcccgag
aacctggatcaggactggcaaacttggcagcgtctgcggcagctcagactctccaaacgg
ggtgcccaaaccccgagcggctacgatgcgttggcggaggcggtgatggcggccgccgag
gcgcttcccactcacccgggcccccgggaacaggcgatgaagcacgtcgaggggctgctg
gaagtgagccaggaatgcctgaatcgctatgccgcggggaagagggtgaagggactcgtg
gactacagcgatatgctggcgatcagccagcgcctcctcgcccagcggccggacgtcctc
gaggagctgaaaacgcgggtggactgcttggtcatcgacgaattccaggacacgaacccc
ctgcagttcgccttggtgtgggcacttttctcaagcggtgtccctgcggtgattgtcggc
gacctcaagcaggcaatcatgggctttcaaaatgcggatccgcgtcttctggaaaacctg
gcagcacgtaatgacacaaagcctttgaccggtaactggcgctcaactccgaaggtcatg
aagtgggtgaaccaggtggggaaggggctgttcggcgatgcctataccgagctcgcgccc
atggcggattatccgagccaccagacggcgttggaggtgatggacttcgaggagggaccg
taccggggcagcacgcggatacccgctcagtacatggcgctcagaatccgcgatctttta
gcggatgataagcagaagatctacgacaagcgcctcaagaaggagaggaggatccgcggc
ggagatgtagcggttctctgtcccatcaaggagcggcttgagcggtacgccgaggcccta
cggcaattgggcatcaagacacgcatggacgaggacggttggtttgattcccgccccgtg
cagatcgcctttcatgccctcagctaccttgccgacccttcggatcgtcatgcagccctt
tatctggcggtgacagagttgggggtgcatgatctccagagcgccgtagcggagctctta
gacggccggaaactcgacgacccggtgctggcgagactggatgcactggtcccatcttcc
gtcgaggccacggtgacagaactggtggcctcggcgctggaggcactggacctctatggt
gtctgcagcagttggcccgatgccgcctcggcgcgcgccaacctgctccggctgcagggt
gaagctgcggaattccagggcgcgaacgtcgaagccctggtcagcggcagatactatggc
agcggtttgaaaacttttcttgcctggctgcgtggcaaggtggagcgggataacaagcag
ccggcaccacgggtactggacgaggacgccgttgtgctcaccacctggcacagctccaaa
ggaagagaatggccggttgtcgctgtctgcgccaccgacacggaggtttattcgcgtttt
cccgaaatgtccgttgtgtacgatgattttgacaacttggctgcagttctcgataaagcg
cgtatggagattagccccgcttttgtggctcctgagacgcaggagcgctttgccgagccg
ctgatgccggaacttcgagaatccgcagttcgccttatttatgtcgccatcacgagggcg
cgcgagaaggtgatcttggagtgccgccggtaccaggagcctgaaaagtgctcgtactgg
acgattctccagcaagcgggacgggtcgagattgacggtaacaagatgatcgtgcttgga
gagaagttcgactgtcgcgtggtgcagtgtggaaagcatgcccccgagggttttgaagac
gagacatctcagggggcaaaggaacttccatccttcggcaggcgggcgatccggccgggc
gcggtgtactgtaagctgacaccggaagtcgttacaccctcctcgcagcatggagcagaa
gcggggaggataatcaccatagcttatggggaaccgctccgtgtggatctggagatcaag
ggatttgaccgcgggaccttcctgcaccggtgttttgaagcctccgtggatactcctgat
cgcctgcaacttgtggcggattctcttggggtaatgctaagcgaggcgggaagagttgct
atcggtgtggggatagaagccttccgcacctggctcaaagattccttggtggcggaaagg
ggccatgtggaagtgccgatcctggcccagaataaggagggcagcgtggtggccggttcc
atcgacctgctggtagagacccctgccggtctgtggatagtggatcataagagtgaccaa
tcggaggaatttgaccgtctttttgctttttatcggccacaactggaggtttatcgtgaa
gcagtgtactccctgtggccagataagaaggttttaggtcttgtcatcaactgggtgagc
catgggaaggtaagcatgtccgagttgtag
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