Gordonia bronchialis: Gbro_1890
Help
Entry
Gbro_1890 CDS
T01102
Name
(GenBank) DNA repair exonuclease, SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gbr
Gordonia bronchialis
Brite
KEGG Orthology (KO) [BR:
gbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbr03400
]
Gbro_1890
DNA repair and recombination proteins [BR:
gbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Gbro_1890
Archaeal homologous recombinant proteins
Gbro_1890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
DksA_CC
AAA_21
End3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACY21145
UniProt:
D0L9F7
LinkDB
All DBs
Position
1980357..1983326
Genome browser
AA seq
989 aa
AA seq
DB search
MRLHRLRMCAFGPFAGDTTVDFDELSADGLFLLHGRTGAGKTTVLDAVAFALFGRVPGAR
DTNRRLHSDHALPEHVPEVELEATVGGRRLRIIRSPDHHRPKRRGTGTTKVNARASLTWL
DGSGPDLTRLPEIGDAVTRLLGMSADQFFQVVLLPQGEFARFLRATSEDRERLLERLFDT
ERFGDLEEWLRTEARESSAALTRRTAVIDRVAGQIVALGGAEAPAEPDLAWAQGCLESAR
SEAEQARAALEAARREVTEAQRAHDDGRRRAELHRRGVQAAERLSRLDDGQDDLAAVTAT
LAQARRAAPLAPLLDEHELAAADAVTAERTWSRARDALVTLPGGAALSDADDATLRDSID
SWTQESGRWEPLAARLAGRPAIVSEIDTLTAQFDDTARRLAELSEVLAALPDRRDRAQAE
LTRAVELRSRVPGLEAQRERAEKVTTALLARARVDQALERITTQVLVAREAHLETREQLV
ELRSRRVAGMAAELAGGLVDGEPCVVCGATVHPEPARPDERGHVGEADEAAAAAAEQAAA
VARGRVESEQAALEERRKSLDEVIGAATREDTEELLQRLSTELADARRAAERVPALQRAV
EAAAAEIDTVRADVATLDSAQSRRQERLASLREDLGELDVAVAEATGGRLSVTERRQELA
DLCEAAGRLRDAVRARDAARSRRDEAGKRLTARCVAAGFDDADALRSALASPESIQEWEA
RVQQAIGLRAAAQETLADADIQDALAAEHVDVALLATALDTVRQAHDRAAGRHTIAARRV
ADLERFVADFWAAADALAPLRDRHAELAGLAELVSGHGQNSRRMSLRSYVLAARLEEVLV
AASARLHQMSSGRYEFVHSDAVGPRGRRGGLGIEVRDEYTGTVRATTTLSGGETFFASLA
LALGLADVVSAELGGRVLDTIFIDEGFGTLDPEALDLVMGVLDELRSGGRVVGVVSHVGE
LRERIPAQLEVVRRDNGSSVHTNQPAAIG
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgagattgcaccgcctgcgcatgtgcgcgttcggcccgttcgccggtgacacgaccgtc
gacttcgacgaactctccgccgacggcctgttcctgttgcacggccggaccggggcgggc
aagacgacggtcctcgacgcggtcgccttcgcgctgttcggccgggtgccgggggcgcgc
gacaccaatcgacgactccactcggatcatgctctgcccgaacatgttccggaggtcgaa
ctcgaagccaccgtcggtggacggcgtctgcgcatcatccgctcgccggatcatcaccgc
cccaagcgacgggggaccgggaccaccaaggtcaacgctcgcgcaagcctgacctggctg
gacggttcgggtcccgacctcacccggctgcccgagatcggcgacgcggtcacccgactg
ctcggcatgagtgccgaccagttctttcaggtggtcctgctgccgcagggcgagttcgcc
cgattcctacgggccacctccgaggaccgggaacgattgctggagcggctgttcgacacc
gagcggttcggcgatctcgaggaatggctgcgcaccgaggccagggagagctcggcggcg
ctgacgaggcggaccgcagtaatcgaccgggtcgccggacagatcgtcgcgctcggtggt
gccgaggccccggccgagcccgatctggcctgggcgcagggctgtctggagtcggcccgg
tcagaggccgagcaggcgcgagccgccctcgaagccgcccgccgcgaggtgaccgaggcg
cagcgtgcccacgacgacggtcggcgccgtgcggagttgcacaggcgcggtgtccaagcc
gccgaacgcctctcgcgactcgacgacggacaggacgacctcgcggcggtgacggcgacg
ctggcgcaggcgcgtcgagccgcaccactcgccccgctgctcgacgagcacgaattggcg
gcggcagatgccgtgaccgcggagcggacgtggtcccgcgcgcgggatgcgctggtcacc
ctaccgggtggggccgcgttgagcgacgcggacgacgccacgctgcgcgattcgatcgat
tcctggacccaggagtccggccgctgggagccgctggccgcacggctcgccggccgcccc
gccatcgtgtctgagatcgacaccctcacagcgcaattcgatgacaccgcgcgacgcctt
gccgagctgtccgaggtgctggcggcgctgccggaccgtcgggaccgcgcccaggccgag
ctgacccgcgccgtcgagctccgttcccgagttccaggcctcgaggcgcagcgggaacgt
gccgagaaggtgaccactgcgctgttggcccgcgcccgggtcgaccaggctctcgagcgg
attaccacgcaggtactcgtggcccgggaagctcatctcgaaacacgggagcagttggtg
gagttgcgatcccgccgggtggccgggatggccgcagagctggccggtgggctcgtcgac
ggtgagccgtgcgtcgtgtgcggtgccaccgtccacccggaaccggcacgcccggacgag
cgcgggcacgtcggggaagcggatgaagcggccgcggccgccgccgaacaggccgccgcg
gtcgcccggggacgtgtcgagtccgagcaggctgcgctggaagaacgccgcaagagcctc
gacgaggtgatcggtgcggcaacacgggaggacaccgaggaactcctccagcgactgtcc
acggagctcgccgacgcccgacgcgctgccgaacgtgtcccggctctgcagcgggctgtc
gaggccgccgccgccgagatcgacactgtccgggcagatgtggccaccttggactcggcg
cagtcacgccgccaggaacggctggcgtcgctccgtgaggaccttggagagctcgacgtg
gcggttgccgaggcgaccggtgggcgtctcagcgtgaccgagcgccgacaggaactcgcc
gatctgtgtgaggccgccggacgcctgcgcgacgcggtgcgggcgcgggatgcggcacgt
tcacgacgggacgaggcgggcaagcgactgaccgcacgatgtgtcgccgccggtttcgac
gacgctgacgccctgcgctccgcgctcgcgtcaccggagtccattcaggagtgggaagcc
cgtgtgcagcaggcgatcgggcttcgtgcggccgcgcaggaaaccctcgccgacgccgac
atccaggacgcgctggccgccgaacatgtcgatgtcgcgttgctcgcgaccgcgctcgac
accgttcgacaggcgcacgaccgcgccgccggcaggcataccatcgcggcacgacgcgtc
gccgatctggaacgcttcgtagccgacttctgggcggcggcggacgcattggcgccgctg
cgagatcgacacgcggagttggccggcctggccgaactggtcagtggtcacggacagaac
tcgcggcgtatgagcctgcgctcatatgtgctcgccgcccggctcgaagaggtcctcgtc
gcggcgtcggcccgactgcaccaaatgtcctcgggacgttatgaattcgtccacagcgac
gccgtcgggccgcgcggtcgacgcggtgggctgggcatcgaggtccgtgacgagtacacc
ggcacggtccgcgccaccaccacgttgtccggcggggagacgttcttcgcgtccttggcg
ctggcgctcggccttgccgacgtggtgtccgccgaattgggcggacgggtgttggacacc
atcttcatcgacgagggtttcggcacgctcgaccccgaggcactggacctggtgatgggt
gtccttgacgaactccgctccggcgggcgcgtcgtcggggtggtcagtcacgtcggcgag
ctccgtgaacggattccggcgcaactggaggtggtccgccgcgacaacggttcgtccgtc
catacgaatcagccggccgcaatcggttga
DBGET
integrated database retrieval system
