Gordonia bronchialis: Gbro_3810
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Entry
Gbro_3810 CDS
T01102
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
gbr
Gordonia bronchialis
Pathway
gbr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Gbro_3810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbr03400
]
Gbro_3810
Enzymes [BR:
gbr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Gbro_3810
DNA repair and recombination proteins [BR:
gbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Gbro_3810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ACY22988
UniProt:
D0L358
LinkDB
All DBs
Position
complement(4094871..4095752)
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AA seq
293 aa
AA seq
DB search
MRVATWNVNSVKQRIPRLLPWLDERRPDVVCLQETKLSDEAFHDVLGADLAERGYAIAHH
GQGQWNGVALLSKVGLDDVTTGFDDMPGYPDPATLEARAVSAVCGGLRIYSLYVPNGRVP
DSDHYRYKLTWLAALAKSISEPSSTLLCGDMNIAPADADVFDPDAYVGHTHVTEPERAAL
SAFAELGLHDVVRDRWPDSRVFSYWDYRAGMFHKDLGMRIDLILAGESATDRVAAAWVDR
KARKGTKPSDHAPVIVDLDEAPDGDIGPVVPPPSNPAKRGSSKVKLPQTSHES
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcgcgacttggaatgtgaactcggtgaagcagcgcatcccgcggttgttgccg
tggctcgacgagcgtcgacccgacgtggtgtgtctgcaggagaccaagctgtccgacgag
gcatttcacgacgtactcggcgccgacctcgccgaacgcggttatgccatcgcccatcac
ggacaggggcagtggaacggggttgcgttgctgtcgaaggtgggcctcgacgacgtgacg
accggattcgacgacatgccgggctaccccgatcccgccaccttggaggcgcgggcggtg
tccgccgtgtgcgggggcctgcggatctactccctctatgtgcccaacggccgcgttccg
gattccgaccattaccgctacaaactgacctggcttgcggcactggcgaagtcgatcagc
gaaccgtcgtcgacgctgctgtgtggcgacatgaacatcgcgccggccgacgccgacgtc
ttcgaccccgacgcctacgtggggcacacccatgtcaccgagcccgagcgggcggcgctg
tccgcgttcgccgagctcggtctgcacgacgtggtccgtgaccggtggccggactcccgt
gtcttcagctattgggactaccgcgccgggatgttccacaaggatctcggcatgcgcatc
gatctcatcctcgccggcgaaagtgccaccgaccgggtcgccgcggcgtgggtggatcgc
aaggcgcgcaaggggaccaagcccagcgatcacgcaccggtgatcgtcgacctcgacgag
gcgccggacggtgacatcgggccagtggtcccgccgccgtcgaatccggccaagcgtgga
tcgtcgaaggtgaagctgccgcagacgtctcatgaaagctga
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