Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_0578
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Entry
GbCGDNIH4_0578 CDS
T03156
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GbCGDNIH4_0578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gbs03021
]
GbCGDNIH4_0578
03400 DNA repair and recombination proteins [BR:
gbs03400
]
GbCGDNIH4_0578
Enzymes [BR:
gbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GbCGDNIH4_0578
Transcription machinery [BR:
gbs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GbCGDNIH4_0578
DNA repair and recombination proteins [BR:
gbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GbCGDNIH4_0578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
Motif
Other DBs
NCBI-ProteinID:
AHJ64984
LinkDB
All DBs
Position
658636..659655
Genome browser
AA seq
339 aa
AA seq
DB search
MVIQRNWQSLIKPEKLDVEPGNEPSRIATIVAEPLERGFGMTLGNAIRRILLSSLQGAAV
TAVQIDGVLHEFSSVAGVREDVTDIVLNIKQLALRMHGEGPKRMMLTATGPGEVTAGQIQ
AGHDIEIMNPDLVLCTLDDGVKLGMEFTVNLGKGYVPASQNRQEDSPIGLIPIDAIYSPV
RRVSYKVEPTRVGQVTDYDKLLLTVETNGAVTPEDSVALAARILQDQLQLFINFEEPQQV
RHDEPQDDLPFNRNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKSEQEMLRTPNFGRK
SLNEIKEVLANMGLSLGMSVSGWPPENIEDLAKRLEEPF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggtcatccagaggaactggcagtctctgatcaagccggaaaagctcgatgtggagccc
ggcaacgagccgtcgcgcattgcgaccattgtggcggagccgctggagcgcggcttcggc
atgacgctcggcaacgccatccgtcgtatattgctgtcatccctgcagggtgctgcggtg
acagcggtgcagatcgacggcgtgctgcatgaattctcgtctgtcgccggtgtgcgtgaa
gacgtgacggatatcgtcctgaacatcaagcagctggcccttcgcatgcatggcgaaggc
ccgaagcgcatgatgctgacggcaactggcccgggtgaagtcacggctggccagattcag
gccggtcatgacattgagatcatgaaccccgatctcgtcctctgcacgctggatgatggc
gtgaagctgggcatggagttcacggtcaatctcggcaagggctatgtccccgccagccag
aaccggcaggaagacagcccgattggtctgatcccgatcgacgctatctattcccccgtt
cgccgcgtgtcctacaaggtggagccgacccgcgtcggtcaggtcaccgattatgacaag
ctgctgctgacggttgaaaccaatggtgcggtgactccggaagattcggtggctttggcc
gctcgtattcttcaggatcagcttcaactcttcatcaacttcgaagagccgcagcaggtc
cgccacgatgaaccgcaagacgatctgccgttcaaccgcaatcttctgcggaaggtggat
gagctggaactctcggttcgcagcgctaactgcctgaagaacgacaatatcgtctatatc
ggcgatctggtgcagaaatccgaacaggaaatgctgcgcaccccgaatttcgggcgcaag
tcgctgaacgagatcaaggaagtcctcgccaatatggggctttccctcggcatgagtgtg
tcgggctggccgccggaaaatattgaggacctggccaagcggttggaagaacccttctga
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