Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_0992
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Entry
GbCGDNIH4_0992 CDS
T03156
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbs03019
]
GbCGDNIH4_0992
03009 Ribosome biogenesis [BR:
gbs03009
]
GbCGDNIH4_0992
03036 Chromosome and associated proteins [BR:
gbs03036
]
GbCGDNIH4_0992
Enzymes [BR:
gbs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
GbCGDNIH4_0992
Messenger RNA biogenesis [BR:
gbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GbCGDNIH4_0992
Ribosome biogenesis [BR:
gbs03009
]
Eukaryotic type
90S particles
RNase
GbCGDNIH4_0992
Prokaryotic type
rRNA processing factors
GbCGDNIH4_0992
Chromosome and associated proteins [BR:
gbs03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
GbCGDNIH4_0992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AHJ66611
LinkDB
All DBs
Position
1133871..1134758
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AA seq
295 aa
AA seq
DB search
MQPPPGIRCGNGRWKSAGTVCSGASTERRPVGSDEASMSATSASQSKYAGIADRSLEAAE
ALLSHRFARRDLLAEALTHRSAVKIMHGQTGQSLPRGAGSNERLEFVGDRVLGLVVAEWL
VERFPLEQEGELGRRLAHLVSQPVLAGIAEQSGLPQILSVAPGEAKAGVRKLATVLSDAM
EALIGALYLDAGLDPVRQFIRRHWEPVMQRQTEPPKDAKTALQEWAQGLGLHLPTYRLAR
REGPPHNPVFWVEVLVGDHVGQGQAGSKRAAEQLAAQDLLGRIRDKTGPDRDRNG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgccccctggtatcaggtgtgggaatggccgttggaaatccgctggaaccgtt
tgttcaggagcatccactgaacgccgtccggtcggttcagatgaggcatccatgagcgcg
acatcagccagtcaatcgaaatatgccgggattgctgaccgttccctggaggctgctgag
gctctgctgagccatcgctttgcccggcgtgatctgctggccgaggcgctgacacatcgc
tccgccgtcaaaataatgcatggccaaacggggcagagcttgccgcgtggcgccgggtcc
aatgagcggctggaattcgttggcgaccgggtcctgggactggtggtggccgaatggctg
gtggagcgttttccgttggagcaggaaggcgaattggggcgccgtttagcgcatctggta
tcccagccggttctggccgggatcgccgaacaatccgggctgccgcaaatcctgtctgtg
gcgcccggtgaggcaaaggccggtgtccgcaagctggcaactgttttgtccgatgcgatg
gaggctctgatcggcgcgctctatctcgatgcgggcctggacccggtgcggcagtttatc
cggcgccattgggagccggtgatgcagcggcagacagaaccgccgaaagatgccaaaaca
gctttgcaggaatgggcgcagggtcttggccttcatctgcccacctatcgtctggcacgt
cgcgagggaccgccgcataacccggtattctgggtggaggttttggtaggtgatcatgtc
gggcaggggcaggcgggcagcaagcgtgccgccgagcaactggcggcgcaggacttgctg
ggccgtatacgagacaagacaggaccagatcgggatcggaacggatga
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