KEGG   Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI0489
Entry
GDI0489           CDS       T00631                                 
Symbol
lsdD
Name
(GenBank) putative general secretion pathway protein D
  KO
K02453  general secretion pathway protein D
Organism
gdi  Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:gdi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    GDI0489 (lsdD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gdi02044]
    GDI0489 (lsdD)
Secretion system [BR:gdi02044]
 Type II secretion system
  General secretion pathway protein
   GDI0489 (lsdD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: CAP54432
RhizoBase: GDI0489
UniProt: A9H699
LinkDB
Position
485562..487880
AA seq 772 aa
MNSDTTSRRGMTSRRAQTAWTGIALCFSIAGCSPDKPPHVSPLGGPLPLGGTAPDLMGGR
IEGTDQVGPAQYSYGRGALPLIRGQGRPYQGGGDIALNFADTDVRDAVSQIMTDILHVNY
AIDPAVHGRVTLHTSQPLTAGQLLPALQIILAQVHAVLIQADGLYRIVPAQADSANPQSS
AAGIAENASLGGSVMVPLRYADAANLAKALQPFLQGGARVTPVDSANAVIVSGEPSARNT
LVDVIHAFDVDWLSSQSYALLPVESGNARDMATALQSALHGGNLVQVLPLARVNAVLVVA
RSARQIDDARRLFALIERNRRATMRSWHVFYVQNSSVNDVTYTLQQAFTPGDVTATPPET
TSGTASQLGQSGFTGTMANAMGGGGLGGSAGTGNTTGLMGGSQQGGVQATAGQAPTGQAG
GGPAAFANPLLGGLDNTASAEGRPQAMRIISNSQHNAILVYGTDQESDTVEQMLRRIDVM
PLQVRIDAVIAEVQLNDALQYGTQFFFKSGGINGVLSTNSQTITTGTLATAAFSHTLPGF
IIGGASGGGAPFAIDALQNVTTVHVLSSPQLMVQDNRAARLQVGQLVPVQIGSQSSTIGT
SIYNQFTYQPTGVIMQVTPHVSEGGLVTLDVSQEVSSVSPTAASTANAASNPTFNDRSVS
SRVVVQDGQTVGLAGLITDSSSRINSGIPWLKNIPVLGVLAGNQNNNRQRTELLILMTPH
VIHDQRDAVDLMEDLRDTHPNAANVPDELRVMRMTGSADPQQRLREKVGLGP
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgaacagtgacacgacttcccgtcgcggcatgacctcccgccgtgcgcagaccgcctgg
accggcatcgccttgtgtttttcgatcgcgggatgcagccccgacaagccgccgcatgtc
tcgccgctgggcggtcccctgccgctgggcggcacggcgcccgacctgatgggtggccgg
atcgagggcacggaccaggtcgggccggcgcaatacagctacggccgcggcgcgctgccg
ctgatccggggccagggccgcccgtaccagggcgggggcgacatcgcgctgaatttcgcc
gataccgatgtccgtgacgccgtctcgcagatcatgacggacatcctgcacgtgaattac
gcgatcgacccggcggtgcacgggcgcgtgacgctgcatacgtcccagcccctgaccgcc
gggcagcttctgcccgccctgcagatcatcctggcccaggtgcacgccgtcctgatccag
gccgacgggctgtaccgcatcgtgccggcccaggccgattcggcaaatccccagtccagc
gcggcagggatcgcggaaaacgcgtcgctgggcggcagcgtcatggtgccgctgcgctac
gccgatgccgcaaacctggccaaggcactgcaaccgttcctgcagggcggcgcccgcgtc
actccggtggacagcgcgaacgccgtgatcgtcagcggcgagccgtccgcgcgcaatacg
ctggtcgatgtcatccatgccttcgacgtggactggctcagcagccagtcctatgccctc
ctgccggtggaatcgggaaatgccagggatatggcaacggcgttgcaaagtgccctgcat
ggcggcaacctggtgcaggtcctgccgctggcgcgggtcaatgccgtgctggtcgtcgcg
cgcagcgcgcggcagatcgacgatgcacggcgcctctttgcgctgatcgaacgcaatcgg
cgcgcgaccatgcggtcgtggcatgtgttctacgtgcagaattccagcgtgaacgacgtg
acctatacattgcagcaggccttcacgccgggcgacgtgacggccacgccgcccgaaacc
acgtccggcacggcctcgcaactgggccagtccggcttcaccggcaccatggccaacgcc
atgggcggcggcgggctgggcggcagcgcgggcacggggaacaccacgggcctgatgggc
ggcagccagcagggcggggtccaggccaccgccggccaggcaccgaccggccaggcgggc
ggggggccggcggcattcgccaatcccctgctgggcggcctggacaacactgccagcgcc
gaaggccgcccgcaggcgatgcggatcatttccaattcccagcataacgcgatcctggtc
tacgggacggaccaggaaagcgacacggtcgaacagatgctgcgccggatcgacgtcatg
ccgctgcaggtccgcatcgatgccgtcatcgccgaggtgcagctgaacgacgcgctgcag
tacggcacgcagttcttcttcaaatccggcggcatcaacggcgtgctcagcaccaacagc
cagacgatcaccaccggcaccctggccaccgccgccttcagccatacgctgcccggcttc
atcatcgggggcgccagcggcggcggcgcgcccttcgccatcgacgcgctgcagaacgtc
accaccgtccacgtcctgtcctcgccgcaactgatggtccaggacaaccgggcggcccgg
ctgcaggtcgggcaactggtgccggtccagatcggctcgcaatccagcaccatcggcacg
tcgatctacaaccagttcacctatcagccgaccggcgtgatcatgcaggtgacgccccat
gtcagcgagggcgggctggtcacgctggacgtgtcgcaggaggtcagttccgtcagcccg
accgccgccagcacggccaacgcggcgtccaatcccaccttcaacgaccgttcggtcagt
tcccgcgtcgtggtccaggacgggcagacggtggggctggccggcctgatcaccgacagt
tccagccgcatcaacagcggcatcccgtggctgaagaacatcccggtcctgggcgtcctg
gcagggaaccagaacaacaaccgccagcggacggaattgctgatcctgatgacgccgcac
gtcatccatgaccagcgcgacgcggtcgacctgatggaggatctgcgcgacacccatccc
aacgcggcgaacgtccccgacgaattgcgggtcatgcgcatgaccggcagcgccgacccc
cagcagcgcctgcgcgaaaaggtcgggctgggaccgtga

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