Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI0724
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Entry
GDI0724 CDS
T00631
Name
(GenBank) putative lytic transglycosylase, catalytic
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gdi01011
]
GDI0724
Enzymes [BR:
gdi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GDI0724
Peptidoglycan biosynthesis and degradation proteins [BR:
gdi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GDI0724
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
CAP54667
RhizoBase:
GDI0724
UniProt:
A9HAB0
LinkDB
All DBs
Position
complement(742075..744081)
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AA seq
668 aa
AA seq
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MRGTTHTPPQIAVRAFLAGAALLAGATFTPLRVQTANARNTDGHPSGPGERNEETALAMP
RIAPPGGGAVGLAQPLSPDVVAQVRRIFSLQRAGAFDDAIRETAQLRDDTLLGDILADRY
LNPAYHPAPGQLRLWLRTFSTLADAPAIHTLLAGLSPRGASLPPLPAQMALAAGTGAAAM
RPPEEDDPAGRAFARNPLLDRTVRDRAEQGVKGARSALHLIKITPGIGDLYAAQLRAEVA
MTLFSAGETALALRTGQDAFIQSGGRIGLAGYVAGLAAWRRGRPDIAEPLFEGASRAELT
AAGIRAGAAFWAARAHRNTGDLAAYHPWLHRAAAAPHTFYGLLAAQLLGLRPAKGQHAAD
TSLPGEPLSGEPAAPSAMPAEDRTMLHAGAPVMGEIDVDAVAAKPAGRRAFALLQVGETA
RAEAALRRLWPEVLGDAALCRSIQLVADAAGLTGLSAQLSSLLASQGAPQPAVPSRFPTP
RLAPSHGFRVDPALVYALTRLESNFDSGAISGSGAHGLMQIMPTTASFVTGRTRRFEAAP
ALLHNAATNLDIGQLYVLYLAHLSEQHAGGRHPSGGDLVRLLASYNAGPGAISRQEALND
CGDDPLLFIESLPSAETRDYVHRALTYLWIYADQMGLPTPSLETLARNEWPAFAAEQDLA
GRHFHTIH
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggacaacacacacacccccacagatcgcggtccgggcctttctggccggtgcc
gcccttctggcaggagcgacgttcacgccgctgcgtgtccagaccgcgaacgcccggaac
acggacggacatccgtccggcccgggcgagcggaacgaggaaacggccctggccatgccg
cggatcgcgccgcctggtggcggagcggtcggactggcccagccgctgagcccggacgtc
gtcgcccaggtacgccggatcttcagcctgcagcgcgcgggggcgttcgacgacgccatc
cgggagaccgcgcaattgcgcgacgacactctgctgggcgacatcctggccgaccgctac
ctgaatcccgcctatcatcccgcgccggggcagttgcggctgtggctgcgcaccttttcc
accctggccgacgcccccgccatccacacgctgctggccggcctgtcgccgcgcggcgcc
agcctgccgccgctgcccgcgcagatggcgctggcggccggcaccggagcggcggccatg
cgcccgccggaagaggacgatcccgccggccgggccttcgcccgcaacccgctgctggac
cggacggtgcgcgaccgggccgagcagggggtgaagggcgcgcgcagcgcgctgcacctg
atcaagatcacgccgggcatcggcgacctgtatgccgcgcagttgcgcgccgaggtcgcg
atgacgctgttcagcgcgggcgaaaccgccctggcgctgcggacggggcaggatgccttc
atccagtccggcggccggatcggcctggccggctatgtcgccggcctggcggcctggcgc
cggggacggcccgacattgccgaaccgctgttcgaaggcgcgtcgcgcgccgaactgacg
gcagccggcatccgggccggcgccgccttctgggcggcccgggcgcaccgcaataccggc
gacctggcggcctatcatccctggctgcatcgcgccgccgccgccccgcacacgttctac
ggcctgctggcggcccagttgctgggcctgcgcccggcgaagggccagcacgccgcggac
acgtcccttcccggtgagcccctttccggcgaacccgccgcgccgtccgccatgccggcg
gaagaccggacgatgctgcatgccggcgcgccggtcatgggcgaaatcgacgtggacgcc
gtggccgcgaaaccggccgggcggcgggccttcgccctgttgcaggtcggcgagacggcc
cgggcggaagccgccctgcgccgcctgtggcccgaggtgctgggcgatgccgccctgtgc
cgctcgatccagcttgtggccgatgccgccgggctgacgggcctgtcggcgcaattgtcg
tcgctgctggcatcacagggcgcgccccagccggccgtgccctcccgctttccgacgccg
cgcctggcgcccagccatgggttcagggtcgatccggcgctggtctatgccctgacgcgc
ctggaatcgaatttcgacagcggggcgatttccgggtccggcgcgcatgggctgatgcag
atcatgccgacgaccgccagcttcgtgaccggcaggacccggcgtttcgaagcggccccg
gcgctgctgcacaatgcggcgacgaacctggatatcgggcagctctacgtcctttacctg
gcgcacctgagcgaacagcatgctggcggccgtcacccgtccggcggcgacctggtgcgg
ctgctggccagctacaatgccgggccgggggcgatttcccgacaggaagccctgaacgat
tgcggtgacgacccgctgctgttcatcgaaagcctgcccagcgccgagacgcgggattac
gtccatcgcgccctgacctatctgtggatctatgccgaccagatgggcctgcccacgccg
tcgctggaaaccctggcgcgcaacgaatggcccgccttcgccgccgagcaggacctggcc
ggccgccacttccacaccatacactga
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