Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_0487
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Entry
Gdia_0487 CDS
T00798
Name
(GenBank) TIM-barrel protein, nifR3 family
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gdj03016
]
Gdia_0487
Transfer RNA biogenesis [BR:
gdj03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
Gdia_0487
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
DHO_dh
FMN_dh
NMO
IMPDH
DeoC
ThiG
PIN_10
Oxidored_FMN
Motif
Other DBs
NCBI-ProteinID:
ACI50283
LinkDB
All DBs
Position
complement(534937..535998)
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AA seq
353 aa
AA seq
DB search
MSSEMLRPVDLGGGVVLRTPVILAPMSGVTDLPFRRLARRLGAGLVISEMIASWAMVREN
QATLRMAEVADDDGPNAVQLAGCEPEAMAQAARIAVDRGADMVDINFGCPVKKVAVGQQA
GSALMRDEALAARLLDAVVRAVDVPVTLKMRMGWDHASLNAPALARIAEQTGIRMVTVHG
RTRQQFYNGTADWSFVRQVKDAVSLPVIVNGDIQTVDDARQALALSGADGVMIGRGCYGR
PWFLAQVAQALTTGDIVPDPDLATEKAIVLDHYDMMLSHFGAHPGLRLARKHVAWYSAGL
PDSAGFRAAINRVDQAQEAIGMISAFYDRHIAAGSHRARRGTAAGGQDAAQAA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgaaatgttgcgtcccgtcgatctgggtgggggggtggtcctgcgcaccccg
gtcatcctcgccccgatgtccggggtgacggacctgccgttccgccggctggcgcggcgg
ctgggcgcgggcctggtcatttcggaaatgatcgcctcgtgggccatggtgcgggagaac
caggccaccctgcgcatggccgaggtcgccgatgatgacggcccgaacgcggtgcagctg
gccggctgcgagcccgaggccatggcccaggcggcgcggatcgcggtcgatcgcggcgcg
gacatggtcgacatcaatttcggctgcccggtcaagaaggtggcggtcggccagcaggcg
ggctcggcgctgatgcgggacgaggccctggccgcgcggctgctggatgccgttgtgcgg
gccgtggacgtgccggtgacgctgaagatgcgcatgggctgggaccatgccagcctgaac
gcgccggccctggcccgcatcgcggaacagacgggcatccgcatggtcaccgtgcatggc
cgcacgcgccagcaattctataacggcaccgccgactggtccttcgtccggcaggtaaag
gacgcggtatcgctgccggtgatcgtcaacggcgatatccagacggtcgacgacgcgcgg
caggccctggcgctgtcgggggcggacggggtgatgatcgggcgcggctgctatggccgg
ccgtggttcctggcccaggtcgcgcaggcgctgacgaccggcgacatcgtgcccgacccc
gacctggcgacggaaaaggcgatcgtgctggatcattacgacatgatgctgtcgcatttc
ggcgcccatcccgggctgcgcctggcgcgcaagcatgtcgcctggtattccgccggcctg
ccggattcggccggattccgcgccgccatcaaccgggtggaccaggcccaggaggccatc
gggatgatctccgccttctatgaccggcacatcgctgccggttcccaccgcgcgcggcgc
ggcacggcggcgggcggtcaggatgccgcccaggcggcttga
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