Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_2864
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Entry
Gdia_2864 CDS
T00798
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Gdia_2864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gdj03400
]
Gdia_2864
Enzymes [BR:
gdj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Gdia_2864
DNA repair and recombination proteins [BR:
gdj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Gdia_2864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Nbl1_Borealin_N
Motif
Other DBs
NCBI-ProteinID:
ACI52595
LinkDB
All DBs
Position
3132327..3133787
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AA seq
486 aa
AA seq
DB search
MDEPLRDSGTAGAGNVPEYSVSEISGAIRRTLEGTFGRVRVRGEITEFKRYPSGHLYFSL
KDEGGKISSVVWRGSVSRLGLKPENGVEVVATGKISSYGERSSYQLIIDRLDYAGEGALL
ARIERLRLKLAAEGLFDAAGKRALPFLPDVIGVVTSAQGAVMHDIRTTIARRFPRRLLVW
PVAVQGEAAAAQIAAAIAGFDAIDGRGPIPRPDVLIVARGGGSLEDLMAFNDEVVLRAAA
ACRIPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAAPARAELVADLGHRAARLTSGLA
RLTQTLRLRLDRAAARLPDLPSLLGTARMRLDDRGHRLDMALPALVARRRAALLAVERAM
PSASLLTGPRRARLALAASHLQSGLRQALRDGHARADRTRLRPAPLAAMLRERRAHLAGL
AGRLESLSPMAVLERGYVLVRDPAGVPVTRAADVRPGGRLVLIFADGEAAVRADRSGEAA
QGRLDI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacctcttcgcgactccggcacggccggggcgggcaacgtgcccgaatattcg
gtctccgagatttcgggggcgatccggcgcacgctggagggcacgttcggccgggtgcgc
gtgcgcggcgagatcacggaattcaagcgctatccgtccgggcatctctatttctcgctg
aaggacgagggggggaagatctcctcggtggtgtggcgcgggtcggtgtcgcggctgggg
ctgaagccggaaaacggggtcgaggtcgtggcgacgggcaagatctcgtcctatggcgaa
cgctcgtcctaccagttgatcatcgaccggctggactacgcgggcgagggcgcgctgctg
gcgcggatcgagcggctgcggctgaagctggcggcggaggggctgttcgacgcggcgggc
aagcgggcgctgccgttcctgcccgacgtgatcggcgtggtgacgtccgcccagggggcg
gtgatgcacgatatccgcaccaccatcgcgcggcgctttccccgccggctgctggtctgg
ccggtcgcggtgcagggcgaggcggcggccgcgcagatcgccgccgccatcgcggggttc
gacgccatcgacggcagggggccgatcccgcgccccgacgtgctgatcgtcgcgcgcggc
ggcgggtcgctggaagacctgatggccttcaacgacgaggtggtgctgcgggcggcggcg
gcgtgccgcattccgctgatttccgccgtggggcacgaaaccgacaccacgctgatcgat
ttcgtgtcggaccggcgcgcgcccacccccacggcggcggccgaactggcggccccggcc
agggccgagctggtggccgatctggggcatcgcgcggcccggctgaccagcgggctggcg
cgcctgacgcagacgctgcggctgcggctggaccgggcggcggcccgtctgcccgacctg
ccgtcgctgctgggcacggcgcggatgcggctggacgatcgcggccaccggctggacatg
gcgctgccggcgctggtcgcgcggcggcgcgcggcgctgctggcggtggaacgggccatg
ccgtccgccagcctgctgaccggcccgcgccgggccaggctggcgctggcggccagccac
ctgcaatccggcctgcgccaggccctgcgcgacgggcacgcgcgggcggacaggacgcgc
ctgcgcccggccccgctggcggcgatgctgcgcgagcggcgtgcccacctggccgggctg
gccgggcggctggagtcgttgtcgcccatggcggtgctggaacgcggctatgtcctggtg
cgcgacccggcgggggtgcccgtcacccgcgccgccgacgtccgtccgggcggccggctg
gtgctgatcttcgcggatggcgaggcggcggtgcgcgccgacaggtccggcgaggccgcc
caggggcggctggatatctga
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