Geobacillus sp. 12AMOR1: GARCT_02156
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Entry
GARCT_02156 CDS
T03966
Symbol
birA
Name
(GenBank) Bifunctional ligase/repressor BirA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea00780
Biotin metabolism
gea01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
GARCT_02156 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gea03000
]
GARCT_02156 (birA)
Enzymes [BR:
gea01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
GARCT_02156 (birA)
Transcription factors [BR:
gea03000
]
Prokaryotic type
Helix-turn-helix
Other families
GARCT_02156 (birA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
HTH_24
BPL_LplA_LipB_2
HTH_23
HTH_5
HTH_36
Rrf2
HTH_AsnC-type
HTH_IclR
HTH_Mga
Fe_dep_repress
HTH_29
Trans_reg_C
HTH_20
A_deaminase_N
Motif
Other DBs
NCBI-ProteinID:
AKM19409
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Position
complement(2141008..2141997)
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AA seq
329 aa
AA seq
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MAHGAQSDTRKKLLELFAEANGEFLSGQKISERLGCSRAAVWKHIEELRKEGFELEAVRR
LGYRIVSTPDKVTANEIQLGLKTETLGHTIHFFEEVDSTQRIAAKLAYEGAPEGTLVVAE
EQKAGRGRLDRKWFSPKGTGIWMSLILRPPIPPQRAPQLTLLVAVAISQAIQEVTGLVPD
IKWPNDILLHGKKGVGILTELQADPDRVHSVIVGIGINVNQTAEQFPEDIRAIATSLAIE
KGERIKRAPLIQEILLRIERLYKQYLAHGFRSIKLLWEGYAVSIGKPVTARTLGGTIRGI
ARGITEDGLLILEDEEQNTHYIHSADIQL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggctcatggagcgcaatcggacacgcgaaaaaaactgttagagctgtttgccgaagcg
aacggcgagtttttgtcgggacaaaaaatcagcgaacggctcggctgttcgcgggcggcc
gtatggaaacacatcgaggagctgcgcaaagaaggctttgaactcgaagcggtgcgccgc
cttggctatcggatcgtaagcacgccggataaggtgacggcgaatgaaatccagctcggc
ctgaaaacggaaacgctcggccatacgatccattttttcgaggaagtcgattccacgcag
cgcatcgccgccaagctggcgtacgaaggggcgccggaggggacgctggtcgtcgcggaa
gagcaaaaagccggccgcgggcgcctcgatcggaaatggttttctccgaaaggaaccggc
atttggatgagccttattttgcgcccgcccatccccccgcagcgggcgccgcaattgacg
ctgcttgtggcggtggccattagccaagccattcaagaagtgaccgggcttgtcccggat
attaaatggccgaacgacattttgcttcacggcaaaaaaggcgtcggcattttaaccgag
ctgcaggccgatcccgaccgcgtccactcggtcatcgtcggcatcggcattaacgtcaat
caaacagcggaacaatttcccgaggacattcgcgccatcgccacgtcgcttgccattgaa
aaaggcgaacgcatcaagcgtgcgccgctcattcaagaaattttgctccgcatcgagcgg
ctgtataagcaatatttggcgcacggcttccgctccatcaagcttctttgggaagggtat
gcggtttcgatcggcaagccggtgacggcaagaacgctgggcggcacgattcgcggcatc
gcccgcggcatcaccgaagacgggctgctcattctcgaagatgaggagcaaaacacccat
tatattcactcagccgatattcagttgtaa
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