Geobacillus sp. 12AMOR1: GARCT_02738
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Entry
GARCT_02738 CDS
T03966
Symbol
rnhC
Name
(GenBank) Ribonuclease HIII
KO
K03471
ribonuclease HIII [EC:
3.1.26.4
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GARCT_02738 (rnhC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gea03032
]
GARCT_02738 (rnhC)
Enzymes [BR:
gea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
GARCT_02738 (rnhC)
DNA replication proteins [BR:
gea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
GARCT_02738 (rnhC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
DUF3378
TBP
Motif
Other DBs
NCBI-ProteinID:
AKM19989
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All DBs
Position
2669369..2670298
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AA seq
309 aa
AA seq
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MSNYVIQADQQLLDALRAHYQDALSDRLPAGALFAVKRPDVVITAYRSGKVLFQGKAAEQ
EAAKWISGASASNETADHQPSALAAHQLGSLSAIGSDEVGTGDYFGPIVVAAAYVDRPHI
AKIAALGVKDSKQLNDEAIKRIAPAIMETAPYAVTVLDNAEYNRWQRSGMPQTKMKALLH
NRTLAKLVDAIAPAEPEAIIIDEFLKRDSYFRYLSDEDRIIRERVHCLPKAESVHVAVAA
ASIIARYVFLEEMERLSRAVGLLLPKGAGAIVDEAAARIIRARGEEALETCAKLHFANTK
KALAIAKRR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaaactatgtgattcaagccgaccaacagctgcttgacgccttgcgcgcccactac
caagacgccttatccgaccggcttccggccggagcgttgtttgccgtcaagcgcccggat
gtcgtgatcaccgcctaccgctcaggcaaagtgctgtttcaagggaaagcggcggagcaa
gaagcagcgaaatggatatcaggggcgagcgcctcaaacgaaacagctgaccaccagccg
tccgctttggcagctcatcaactcgggtctctttccgccatcggttccgatgaagtcggc
accggcgattatttcggcccgatcgtcgtcgccgccgcctacgtggatcggccgcatatc
gccaaaatcgcggcgcttggcgtgaaagattcgaaacaattgaacgatgaggcaatcaaa
cggatcgcccccgccatcatggaaacggcgccgtatgccgtcactgtgcttgataacgcc
gaatacaaccgctggcagcgaagcggcatgccgcagacgaaaatgaaggcgctgcttcac
aaccggacgctcgcgaaacttgttgacgccatcgcgcccgccgaaccagaagcaatcatc
atcgacgaatttttaaaacgggattcgtatttccgttacctttccgatgaagatcgcatt
atccgcgagcgggtgcattgcctgccaaaagcagaaagcgtgcacgtggcggtcgccgcc
gcctcgatcatcgcccgctatgtgtttttagaagagatggagcgattatcccgcgccgtc
ggcctcctgcttccaaaaggtgccggcgccatcgttgacgaagccgccgcccggatcatc
cgcgcgcggggggaagaagcgcttgagacgtgcgccaagcttcatttcgccaatacgaaa
aaggcgcttgccatcgccaagcgccggtaa
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