Geobacter sp. M18: GM18_3647
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Entry
GM18_3647 CDS
T01421
Name
(GenBank) 2-oxoglutarate dehydrogenase, E1 subunit
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
geb
Geobacter sp. M18
Pathway
geb00020
Citrate cycle (TCA cycle)
geb00785
Lipoic acid metabolism
geb01100
Metabolic pathways
geb01110
Biosynthesis of secondary metabolites
geb01120
Microbial metabolism in diverse environments
geb01200
Carbon metabolism
geb01210
2-Oxocarboxylic acid metabolism
Module
geb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
geb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GM18_3647
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GM18_3647
Enzymes [BR:
geb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
GM18_3647
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ADW15075
UniProt:
E8WP92
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All DBs
Position
complement(4269286..4271979)
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AA seq
897 aa
AA seq
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MGILNNLSPQWIESQYELWKREPEQLSEAWRTFFTGFDLGAARPAPGPALLPGSEEALKQ
SAVQSLIYRYRDIGHLLACTDPLSPCLIEHPLLSLPAFGLEPTDLDKTFHTRRFMRRSAT
LKEILQVLRSTYCGSVGVEFMHLQDPEERQWLIDRMEPGGNRGFFTPEKRLLLLKKLKEA
ALFERELHKKFPGQTRFSLEGGDVLIPLLDAAVAKAASLGVTDVVFGMPHRGRLNVLCNL
FGMPYENMFAEFADNVEYGVVGEGDVKYHKGFSVDLPVSGGGSVHLTLTSNPSHLEAIDP
VVEGKCRARQDRIGTEGETRVLPLLIHGDAAFSGQGVVAETLNLSQLAGYRTGGTLHIVL
NNQIGFTTSAADARSSHYATDAAKMVQAPVFHVYGDDPEAVVHVTELAVSYRDRYRKDVV
VEVICYRRHGHNEGDEPYFTQPLMYQQIKLRPQLHSLYELELLAEGVAEEELKVIENEVV
QRLTQAGERAAAPAESAFLARWSGMKPGVSKVAVPTAVASATLLELSEQLARVPEGFNPH
PKVAAVLQKRRDAVIKGGPLDWGNVETLAYATLLSGGLSVRLSGQDVRRGTFSHRHAALF
DQVTGDTYLPLCSVLDKGARFCAFDSMLAEFSVLGFEYGYSLEAPEALTIWEAQYGDFAN
GAQVIIDQFLVSGEAKWERSSGLVLMLPHGYEGQGAEHSSARIERFLELAAAGNIQVVYP
TTPAQLFHVLRRQMLQPFRKPLILFTPKSLLRHPDCVSRLEELSSGSFREVIAEPAVGEA
MRQVLICSGKIYYDLLGRIRKDQLQGHALVRIEQLYPLPTEQLRDELQRYPSGTRFAWVQ
EEPRNMGAWRFIHEPLSELLGTVPRYVGRPDAAAPASGSHRLDRVEQERIIDEALKT
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgggtatattgaataacctaagccctcaatggatcgagagccagtacgagctgtggaag
cgggagccggagcagctttccgaggcttggcgcacattcttcaccggcttcgacctgggg
gctgcacgccctgcacccggcccggcgctcctgccggggtccgaagaggcgctgaagcag
tccgcggtccagtcgctcatttaccgttaccgggacatcggccacctgctggcctgtacc
gatcccctttccccctgcctgatcgaacaccccctgctctccctcccggccttcgggctg
gagccgaccgacctcgataagaccttccataccagacgtttcatgaggagaagtgcaacg
ctgaaggagatcctgcaggtgctgcgcagcacctactgtggttcggtcggtgtcgagttc
atgcatctgcaggacccggaggagcgccagtggctcatcgaccggatggagccgggcggc
aaccgcggcttcttcacgcctgaaaagcggctcctgcttctgaagaagctgaaggaggcg
gcccttttcgagcgtgaactgcacaagaagttcccgggccagaccaggttttcgcttgag
gggggggatgtcctgatcccgcttctggacgccgccgtagccaaggccgcctcgctgggg
gtcaccgacgtagtgttcgggatgccgcaccgcgggcgccttaacgttctgtgcaacctc
ttcggcatgccctacgagaacatgttcgccgagttcgccgacaacgtggaatacggtgtg
gtaggcgaaggggatgtgaagtaccacaaaggtttctccgtggaccttccggtctccggg
gggggaagcgtgcacctcaccctcacctccaacccgagccacctggaggcgatcgacccg
gttgtggagggtaaatgccgggcgcgccaggaccggatcggaaccgagggcgagacaagg
gtgctgccgcttctgatccacggcgacgccgccttctccggccagggggtggttgccgag
accctgaacctctcccagctggctggctaccgcaccggcggaacgctgcacatcgtgctc
aacaaccagatcggtttcaccaccagcgcagccgatgcccggtccagccactacgccacc
gatgcagcgaagatggtgcaggcgccggtgttccacgtctacggcgacgaccccgaggcg
gtggtgcacgtcaccgaactggcggtgagctaccgcgatcgctaccgtaaggacgtggtg
gtcgaggtgatctgctaccgcaggcacgggcacaacgaaggggacgagccgtacttcacc
cagccgctcatgtaccagcagatcaagctccgcccgcagctgcactctctgtacgagctg
gagcttctggcagagggggtagccgaggaggagctgaaggttatcgagaacgaggtggtg
cagcgcctgacccaggcaggggagcgcgccgcggccccggccgagtcggcctttctggcg
cgctggagcggcatgaagcccggtgtctcaaaggtagcggtgccgaccgcggtggcctcc
gccacgcttctggagctctcggagcaactggcccgtgtcccggaagggttcaacccgcac
ccgaaggtggccgcagtgctccagaagcgccgcgacgcggtgatcaaggggggaccgctg
gactggggtaacgtggagacgctggcctacgccacgctcctctccggcggcctttcggtc
cggctttccggacaggacgtccggcgcggtaccttcagtcaccgccatgccgccctcttc
gatcaggtcaccggcgatacctacctgccgctttgcagcgtgctggacaagggggcgcgt
ttctgcgcctttgacagcatgctggccgagttctccgtgctcggcttcgagtacggctat
tctctcgaagcacccgaggcgctcaccatctgggaggcccagtatggcgacttcgccaac
ggggcccaggtgatcatcgaccagttcctggtgagcggcgaggcgaagtgggagcgctcc
agcggcttggtgctcatgctgccgcacggctacgaggggcagggggcggaacattccagc
gcccgcatcgagcgcttcctggagctcgccgccgcggggaacatacaggtggtctacccg
acgactccggcccagctcttccacgtgttgcgccggcagatgctgcagcccttcagaaag
ccgctgatccttttcaccccgaagagtctgctgcggcaccccgactgtgtctcgaggttg
gaggaactgagctccgggagtttccgggaggtgattgccgagccggccgtgggcgaagcg
atgcgccaggtgctgatctgcagcggcaagatctactacgatcttctggggcgaatcagg
aaggaccagttgcaggggcatgccctggtcaggatcgagcagctctaccccctcccgaca
gagcagttgcgggacgagttgcagcgctacccgtccggtacccgtttcgcctgggttcag
gaggagccgcgcaatatgggggcatggcgcttcattcacgagcctctcagcgagcttttg
gggacggttcccaggtacgtcgggcgtcccgacgccgcggcgccagcctccggctcgcac
cgtctggaccgggtggagcaggagcgcatcatcgacgaggcgttaaaaacctga
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