Gemella sp. ND 6198: CG018_02525
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Entry
CG018_02525 CDS
T05584
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
geq
Gemella sp. ND 6198
Pathway
geq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
geq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CG018_02525 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
geq03400
]
CG018_02525 (xth)
Enzymes [BR:
geq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CG018_02525 (xth)
DNA repair and recombination proteins [BR:
geq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CG018_02525 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AXI26395
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All DBs
Position
555849..556613
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AA seq
254 aa
AA seq
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MKCISFNVNGLRAIVQKNFEENFKKLDADFFCLQETKMQEGQLNLEFDGYYSYFNYAERK
GYSGTAIYTKHKPLRVTYGLGIDEHDTEGRVITLEYEKFFFVTVYTPNSGSELKHLNYRM
EWEKDFKDYLIKLNTKKGVVVCGDLNVAHTEIDLKNPKSNTKNAGFTQEERGKFTELLNA
GFIDTFRYFYPNLTGVYSWWSYRFNARKNNAGWRIDYFLISREIECYLESAKIHNDIFGS
DHCPVELILKEEIL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtattagttttaatgttaatggattgcgagcaatcgtccagaaaaattttgaa
gaaaattttaaaaagttggatgcagattttttctgtttacaagaaacaaaaatgcaagaa
ggacaattaaatttagagtttgacggctattatagttattttaactatgcagaaagaaaa
ggatattcaggaacggctatttacacgaaacataaacctttaagggtgacctatgggtta
ggtattgatgaacacgatacggaaggacgggttattacgctggaatatgaaaaatttttc
tttgttacggtttatacacctaattcaggtagtgaactgaagcaccttaattatcgtatg
gaatgggaaaaagatttcaaagattatttaattaagttaaatactaaaaaaggtgtagtg
gtttgtggagatttaaatgtagcgcatacagaaatagatttaaaaaatccaaagtctaat
acaaaaaatgcaggttttacacaagaagaacgtgggaaatttacagaattgttaaatgca
ggctttattgacacattcagatatttttatccaaatttaacaggagtatattcatggtgg
agttatcgttttaatgcacgtaaaaataatgccgggtggagaattgattattttcttatc
agtagagaaatagaatgttatttagaatctgcaaaaattcataacgatatatttggaagt
gatcattgccctgtggaattaattttgaaagaggaaatattgtag
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