Gemella sp. ND 6198: CG018_07980
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Entry
CG018_07980 CDS
T05584
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
geq
Gemella sp. ND 6198
Brite
KEGG Orthology (KO) [BR:
geq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
geq03009
]
CG018_07980
Enzymes [BR:
geq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CG018_07980
Ribosome biogenesis [BR:
geq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CG018_07980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3006
Motif
Other DBs
NCBI-ProteinID:
AXI27346
LinkDB
All DBs
Position
complement(1723072..1723971)
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AA seq
299 aa
AA seq
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MEQKKIIYNSDKSERIDKFLQQELIDVSRTNIQNLIVDGYIKVDGKPTKTNFKLKNGNII
TIYYKEPEELNVVKQNIPVDIVYEDNDLIIVNKAKGMVVHPSPGHKDGTLVNALLFHSKL
SSINGTVRPGIVHRIDKDTSGLLVVAKNDKAHVKLSEMIANKEVKRKYYALVHGSIKHDY
GTIDAPIARNPKDRKEMAVIDEGKPSITHFKVIDRFENYTLVECELETGRTHQIRVHMKY
INHPLVGDLVYGPRKTLNTNGQALHSKSIEFNHPITDENLHFETEIPKYLLDIMDKLDK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaaaaagataatttataattctgataagagtgaacgtattgataaattttta
cagcaagaattaattgatgtatcaagaacaaatattcaaaatttgatagtagatggatat
ataaaggtagatggtaaacctactaaaacaaattttaaattaaaaaacggtaatataatt
acaatttattataaagaacctgaagagttaaatgtagtaaaacaaaatattccggtagat
attgtttatgaagataatgatttgattatagtaaataaagctaaaggtatggttgttcac
ccgtcacctggacataaagacggaacattagttaatgctctattatttcatagtaaatta
tcaagtattaacggaactgtaagacccggaattgttcacagaattgataaagatacttca
ggtttgttggtagtagccaagaatgataaagcacatgtgaaattatcagaaatgatagct
aataaagaggttaaaagaaaatattatgctttagttcatggcagtattaaacatgattat
ggaacaatagatgctccaatcgcaagaaatccaaaagatcgtaaagaaatggctgttata
gatgaaggtaagccatcaataacacattttaaagtaattgacagatttgaaaattataca
ctcgttgaatgtgagttggaaacgggtagaacacatcaaatcagagtacatatgaaatat
attaatcatccgttagtaggtgacttagtatatggaccacgtaaaacattaaatacaaat
gggcaagcgcttcattctaaaagtattgaatttaaccaccctattacagatgaaaatctt
cattttgagacggaaatacctaaatatttactagatattatggataaattagataaatag
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