Gemmata sp. SH-PL17: VT84_16740
Help
Entry
VT84_16740 CDS
T04358
Symbol
cca
Name
(GenBank) CCA-adding enzyme
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VT84_16740 (cca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ges03019
]
VT84_16740 (cca)
Enzymes [BR:
ges01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
VT84_16740 (cca)
Messenger RNA biogenesis [BR:
ges03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VT84_16740 (cca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AMV26048
UniProt:
A0A142XGA0
LinkDB
All DBs
Position
complement(3884432..3885889)
Genome browser
AA seq
485 aa
AA seq
DB search
MTDREFALDVVRKLQNAGFTALWAGGCVRDELLGLTPDDYDVATSARPEQLRPLFRRRNE
IGAHFGVVQVIGPKSDDGEWLTIEVASFRADGVYIDGRRPETVTFSSPEEDAQRRDFTIN
GMFFDPVKAELIDFVGGRADLEAKTLRAIGDPVARFTEDKLRILRAVRMATRFALAVDPA
THDAARAMAAQIQVVSAERIAEELRKLLVHPNRAHGLGLLHELGLAAAILPEVAAPNVWA
DTVRVVEGLGEKGTPTPLSPLPEGKGEERRPNPLTPFASSSAGPVSGASRGPATKERGTE
PSLVLSPSPLGGGVGEGFFSPFPLVFAAVLHTTGKATAERIAERLKLSNIETVRLSWLVE
KQDYLLDAPTMRASKLKPILVHPGIEELLALHRAIALARGSSIEHVEFCERVLRNTPPEE
LNPPPVLTGEDLIAKGLKPGPAFKRLLDAVREAQLEGRVATKDQAHDLVKQLLAESVSSS
GTPPV
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacggaccgcgaattcgcactcgatgtcgttcgtaaactccagaacgctggcttcacg
gcactttgggccggtgggtgcgtgcgcgacgaactgctcggactcacccccgatgactac
gacgtcgctacgtccgcgcgcccggagcagttgcgcccgctgttccgtcggcggaacgag
atcggtgcccacttcggcgtcgtgcaagtcatcggaccgaagagcgacgacggcgaatgg
ctcacgatcgaagttgcgagcttccgcgccgacggggtttacatcgacggtcggcgcccc
gaaacggttacattctcgtcgcccgaagaagacgcccagcgccgcgacttcaccatcaac
ggcatgttcttcgacccggtgaaggcggaactcatcgacttcgtcggtgggcgcgcggat
ctcgaagcgaaaactctacgcgccatcggcgatccggttgcgcggttcaccgaggacaag
ttgcgcatcctgcgagcggtgcgcatggcgacccgctttgcactagccgtagaccccgcc
acgcacgacgcggcccgcgcaatggccgcacagatccaagtcgtttccgcggagcgcatt
gcagaagagttgcggaaactgctcgttcatccgaaccgcgcacacgggctggggttgctc
cacgaattgggactagctgccgcgattctgcccgaggttgccgcgccgaacgtgtgggcg
gatacggttcgggtggtggagggattgggggaaaaaggcacacctacccccctgtccccc
ctccctgaagggaaaggggaggaaagacgacctaaccccctaacccccttcgcttcttcg
agcgccggtcctgtcagcggagcttctcgcggaccggcgacgaaggaaaggggaacagag
ccatcgttggttttaagcccctctccccttgggggaggggttggggaggggttcttctcc
ccattcccgctcgtatttgcggccgtgttacacaccacgggtaaggcgaccgcggagcgc
atcgcggagcgcctgaagctgtcgaacatcgaaacggtgcggctcagttggctcgttgag
aagcaggactacttgcttgacgcgcccacaatgcgcgcgagcaaactgaaaccgatcctc
gttcaccccggcattgaagaactgctcgcgctccatcgagcgatcgcactggcgcgcggg
agcagtatcgaacacgtcgaattctgtgagcgtgtgttgaggaacacgcccccagaagaa
ttgaacccgccccccgttctgacgggcgaggatcttatcgcaaaggggctgaagcccggc
cccgccttcaagcggctgctcgatgccgtgcgggaggcgcaacttgaggggcgcgtggcg
acaaaagatcaggcacatgatcttgtgaagcaattacttgcggagtcggtatcttcgtct
ggaacaccgccggtgtga
DBGET
integrated database retrieval system
