KEGG   Gemmata sp. SH-PL17: VT84_33725
Entry
VT84_33725        CDS       T04358                                 
Symbol
hsdR
Name
(GenBank) Type-1 restriction enzyme R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ges  Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:ges00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ges02048]
    VT84_33725 (hsdR)
Enzymes [BR:ges01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     VT84_33725 (hsdR)
Prokaryotic defense system [BR:ges02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   VT84_33725 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N Ala_racemase_N CbiA
Other DBs
NCBI-ProteinID: AMV29403
UniProt: A0A142XQU6
LinkDB
Position
complement(7853022..7855784)
AA seq 920 aa
MTPEQKARLQIDRLLTATGWVVQDFADMNVYAGVGVAVREFQLKTGAADYLLYADGKVIG
VVEAKPEGHTLTGVETQSAKYAEGLPKNLPAHSLPLPFAYESTGSVTQFTNYLEPDSRSR
EVFSFHQPEELLRLVGLEAQVRARLKRMPPLDTTRLWSVQEVAIRELEKSLAANRPRALI
QMATGSGKTFTAVNACYRLAKFAGAKRILFLVDRNNLGRQTLNEFQQFTSPYTGMKFTDE
YTVTQLKKNSVPSSAKVTITTIQRLFSILKGDADYEEENEEGSLYETDGAFSKKPVEVEY
NPSIPIESFDFIVVDECHRSIYNLWRQVLDYFDAFTIGLTATPTAQTLGFFNQNLVQDYS
HERAVADGVNVGYDVFRIETQVCKNGVKLVREPGAFVLHRDRRTKKRKLKELDEDKTFTA
TQLDRDVVVPAQIRLVIQTFRDNLPIIFPGRTEVPKTLIFAKVDQHAEDIVQLVRDEFGK
GNEFCQKITSKTTGKKPEDLLADFRNSYFPRVAVTVDMIATGTDVKPLECLIFMRNVKSL
AYFEQMKGRGCRVVDADTLKSVTPDANAKTHFVIVDAVGVCEDEKQATKSLNAKPSIPFD
KVLDAVKTGVADAELVSTLASRLTRLERQLTAKQEAAITKAAGGATISDLAASLLTSIDP
DEVVQHAVNKFQLPHGQEPTDAQFSKAEEERMREALKPFHVADLRRAILDARAELEQVVA
ESAEDMVVRAEFDAAALEKAKGLITSFREFLEVHREEIEALQILYSRPHRAGLRYSQVRE
LADALKRPPHRLEPERVWTAFATIAPTKVKSEGGKKLVDVVALVRHALDPSSELASVERT
VDQRYQAWLKEQANSGMVFSPEHRKWLDAIKDHIATSLSIDRDDLSEVPFNQMGGLGKAH
QLFGDELTGLLEDLNTRLAA
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgacgcccgaacaaaaagcccgtctgcaaatcgaccgtctgcttactgccaccggctgg
gtggtgcaggactttgcggacatgaacgtctacgccggcgttggtgtggcggtgcgcgag
tttcagctcaagaccggcgccgcagattatctcttgtacgcggacggaaaagtcatcggg
gtcgtcgaggccaagcccgaggggcacacgctcaccggtgtcgaaacccagtcggccaag
tacgccgaggggttgcccaagaacctcccggcgcattcccttcccctgccgttcgcctac
gagtccaccggcagcgtcacccagttcacgaactacctcgaaccggactcgcgcagccgc
gaggtgttctcgttccatcaacctgaagaactgcttcggctcgtcggcctcgaagctcag
gtccgggcgcgcctcaaacggatgccgccgctcgacacgaccaggctgtggtccgtccag
gaggtagcaatccgcgagctggagaagtccctggctgcaaatcggcctcgggcactcatc
cagatggcgacgggctcggggaagacgttcaccgccgtcaacgcgtgctaccggttggcc
aagttcgccggagccaagcgaatcttgttcctggtggaccgcaacaacctcgggcggcag
acgctcaacgagtttcagcagttcaccagtccgtacacgggaatgaagttcaccgacgag
tacacggtcacccagctcaagaagaacagcgtcccgtcgtccgcgaaggtcaccatcacg
accatccagcgcctgttctcgatactcaagggcgacgcggactacgaggaggagaacgag
gaggggtcgctctacgaaaccgatggcgcgttctcgaaaaagccggtcgaggtcgaatac
aacccgtccatccccatcgagtcgttcgacttcatcgtggtcgatgagtgccacaggagc
atctacaacttgtggcgtcaggtgctcgactacttcgacgcgtttactatcgggttgacc
gccacacctacggcccagacgctcgggttcttcaatcagaacttggttcaggactactcg
cacgagagggccgtcgcggacggggtgaacgtcgggtacgacgtgttccgcatcgaaacg
caggtgtgcaagaacggggttaagctcgtcagagaaccgggcgcgttcgttctccaccgg
gaccggcggaccaagaagagaaagttgaaggagttggacgaggacaagacgttcacggcc
actcagctcgaccgcgacgtcgtcgtgccggcccaaattcggctcgtcattcaaacgttc
cgcgacaacctacccattatcttcccgggccgcaccgaggtgccgaagacgctcatcttc
gccaaggtcgaccaacacgccgaggacatcgtacagctggtccgagacgagttcgggaag
gggaacgagttctgccagaagattacctcgaagacgacgggtaagaagcccgaggacctg
ctcgccgatttccgcaacagctacttcccgcgggtcgcggtgaccgtggacatgattgcc
accgggaccgacgtgaagccgctcgaatgcctcatcttcatgcggaacgtcaaatcactc
gcgtactttgagcagatgaaggggcgcgggtgccgggtcgtcgatgcggacacactcaag
agcgtgaccccggacgccaacgcgaagacgcatttcgtcatcgtggacgcggtgggtgtg
tgcgaggatgaaaaacaggccaccaagtcgctcaacgccaagccgtccatcccgttcgat
aaagtgctggacgcggtcaaaaccggggtcgcggacgcggaactcgtttccacactcgcc
tcacggttgacgcgtctagaacgccagctaacggcgaagcaagaggctgctatcaccaag
gccgcgggcggtgcgaccatctcggacctcgccgcctccctgctcacgagcatcgacccg
gatgaggtcgttcagcacgccgttaacaagttccagttacctcacggacaggagccgacc
gacgcgcagttcagcaaagccgaggaagagcgaatgcgcgaggcactgaaaccgttccac
gtcgccgatttgcgccgggccattttggatgctcgggccgaactcgaacaggtcgtcgcg
gagagcgctgaggacatggtagtccgcgcagaattcgacgccgcggctttggagaaagcg
aaggggttaatcacgtcgttccgtgagttccttgaggtccatcgggaggaaatcgaagcg
ctgcaaatcctctacagccggccgcaccgagctggactacgttactcgcaagtgcgagaa
ctggcagatgcgttgaagcgcccgccgcatagattagagccagagcgagtgtggaccgca
ttcgcgaccatcgcgcctacaaaggttaagagtgaaggcggcaaaaaactcgtcgatgtg
gtcgccctcgtgcgccacgcgctcgacccgtcttcggaactagcttcggttgagcgcaca
gtggaccaacgttatcaggcgtggctgaaagagcaggccaactccggtatggtgttcagc
cccgaacaccgaaaatggctcgatgctattaaggaccacattgcgaccagcctgagcatc
gaccgcgacgatttgtccgaagtgccattcaatcagatgggtggtttgggcaaagctcat
caactgttcggtgacgaactcaccgggctgctcgaagacttgaatacgagacttgcagca
tga

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