Geosporobacter ferrireducens: Gferi_04125
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Entry
Gferi_04125 CDS
T04493
Name
(GenBank) dipeptidase PepV
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
gfe
Geosporobacter ferrireducens
Pathway
gfe00300
Lysine biosynthesis
gfe01100
Metabolic pathways
gfe01120
Microbial metabolism in diverse environments
gfe01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Gferi_04125
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfe01002
]
Gferi_04125
Enzymes [BR:
gfe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Gferi_04125
Peptidases and inhibitors [BR:
gfe01002
]
Metallo peptidases
Family M20
Gferi_04125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AOT68815
UniProt:
A0A1D8GD35
LinkDB
All DBs
Position
complement(805216..806613)
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AA seq
465 aa
AA seq
DB search
MLEQKILSMEHEIIQSTQEILRIKSVKEKAEKGKPFGNGINEALQYALRLAKDFGFETKN
FDGYAGHAEFGSGEEIIGVLVHLDVVPEGTNWSFPPYSAEIHDGKIYARGAIDDKGPAIA
ALYAMKAIKDLNLDINKKIRIIFGTDEESGWGCMKHYFEKEKAPSCAFTPDAEFPVIHGE
KGIVIFDLVKELRGDSFDNGLKIKSIKGGNRANMVPDYCEAQLICAEEELEEVRENLAKT
LSNTGYSMEITEKNNIITVKSYGISAHGSTPEQGKNAISQLLVFLSRLQLQNGEGSKFVK
LYADKIGMEFNGESIGCGFEDDASGKLVFNVGVIDFTEQSVRVTVNIRYPITYHLDAIYE
GMKEVLGESGVEICELDHMKPIYMPKDHELVQRLMKVYREITGDQAEPITIGGGTYARAM
ENAVAFGPLFPGQPELAHQKDEYIAIGHLMKITNIYAQALYELAK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgttggaacaaaaaattttatctatggagcatgaaatcatacaatcaactcaagaaatt
ttgcgaattaagagcgtgaaggagaaggcggaaaagggaaaaccctttggaaacggaatt
aatgaagcacttcaatatgctttaaggcttgctaaggattttggatttgaaacaaaaaat
tttgatggctatgccggacatgctgagtttggaagcggcgaagaaattattggtgttctt
gtacatttggatgtggtaccggaaggtacgaattggtcctttccgccctatagtgcagaa
attcatgacggaaaaatatatgcaagaggtgcaattgatgacaagggccctgccattgca
gcgctctatgcgatgaaggcgattaaggatttgaatctggacatcaataaaaaaatccgt
attatttttggcaccgatgaagagagtggatggggctgtatgaagcattatttcgaaaaa
gaaaaggcacctagctgtgcatttacaccagatgccgaattccctgtaatccatggcgaa
aaaggaattgtaatttttgatttggtgaaagaactgagaggggatagctttgataatggg
ctgaaaatcaaatctatcaagggtggaaatcgtgcaaatatggtaccggattactgtgaa
gcacaattaatatgtgctgaagaagaattggaagaggttcgggagaatctggcaaaaacc
ttaagcaatacaggctatagtatggaaattacggaaaaaaataatattatcactgtcaaa
tcctatggtatttcagctcatggaagtacaccggaacaagggaaaaatgcgatttcacaa
ctattggtctttttgagccggcttcaattacagaacggtgagggcagtaaatttgtgaaa
ctctatgcagataaaattggtatggagttcaatggagaatccataggttgtggttttgaa
gatgatgcttccggaaagctggtctttaatgttggagtgattgattttacagagcaatca
gtgcgtgtaacggtaaatattcgatatcccatcacctatcacttagatgctatttatgaa
gggatgaaggaagtccttggagaaagtggtgttgaaatctgtgaactggatcatatgaaa
ccgatttatatgccgaaggatcatgagttggtacaacgtttgatgaaagtgtatcgggag
atcacaggagatcaggcagagcccatcacgatcggtgggggaacctacgcgagagcgatg
gaaaatgcagtagctttcggtcctctgtttccgggacaaccggaacttgctcatcagaaa
gatgagtatatcgctatcggccatttgatgaaaattaccaatatctatgcacaagcttta
tacgagctggctaaataa
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