Geosporobacter ferrireducens: Gferi_26925
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Entry
Gferi_26925 CDS
T04493
Name
(GenBank) hypothetical protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
gfe
Geosporobacter ferrireducens
Pathway
gfe00550
Peptidoglycan biosynthesis
gfe01100
Metabolic pathways
gfe01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Gferi_26925
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Gferi_26925
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gfe01011
]
Gferi_26925
Enzymes [BR:
gfe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Gferi_26925
Peptidoglycan biosynthesis and degradation proteins [BR:
gfe01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Gferi_26925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AOT73329
UniProt:
A0A1D8GR02
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All DBs
Position
5731177..5732784
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AA seq
535 aa
AA seq
DB search
MLISRLAYIQVLRRDDFYQKATNQWFKEIPIGVARGKIFDRNMKPLTNKQKTQYLVIFPE
LFQKTEQNLEIIAKLTGVKTYMLRYEKITGLRPVQLKVLDDQVSLLKKAVGIRGVYPVEA
EDRYAETGLASHIIGYINKIDNTGHQGLEKNFDEVLKENQDFKIGAIVDAQKRMIPGLGY
KIIQENTPDKRKSIVTTLDAAIQQIAEEEFDRSHHKGSVVVLDIQSGDVIAMVSRPNYNQ
DDVAASLNSNNLELFNRAIQIPYPPGSVFKMVVAAAALENHLISLSDTFFCSGAEEIGDV
VIRCSSYERGGHGQINLENAFSLSCNSYFIQLGRLVGGKEILSMAEKMGLGHKTGIELPE
EIAGTLPDGDYIKGAGIGNISIGQGTLEVTPLQIARLTAIIANDGVDNGVHLIRHIVDEY
GNILEDYSKTNAQRVLSPDTATQLQHMMQKVVAEGTARNSDMTAAIDAAGKTGSAEAVSD
RKNTVHAWFTGYFPSKNPRYAITVVVEDGGSGGRIAAPTFKNIARRINILENESN
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcagtcgtttggcatatatccaagtacttagaagagatgatttttatcaaaaa
gccaccaatcaatggtttaaagaaatcccaatcggcgtagcacgtggtaaaatttttgac
cgtaatatgaagcctctaacaaataagcaaaaaacacaatatcttgtaatatttcctgaa
ctttttcaaaaaacagaacaaaatttagagattatagccaaacttacaggggtaaaaact
tatatgctaagatacgagaaaatcactggcttacgtcctgttcaattgaaagttctcgac
gatcaggtatccttattgaaaaaagccgtgggaattagaggcgtatatcctgtagaagca
gaggatcgatatgcagaaaccggtttggcatctcatattatcggctatattaataagatt
gataatacggggcatcagggattagaaaaaaactttgatgaagttctaaaagaaaaccaa
gactttaaaattggagccatcgtagatgcgcaaaaaagaatgattcctggattaggatat
aaaattatccaagaaaacactccagataaacggaagagtattgtcactactttagatgcc
gccatacagcagatcgccgaagaagaatttgaccgttctcatcacaagggcagcgttgtt
gtattagatattcaaagcggtgatgtaattgccatggtcagcagaccgaactacaatcag
gatgatgtagcagcatcgcttaacagtaataatctggagctctttaaccgtgcaatacag
attccctatccaccaggctctgtttttaaaatggtagtagctgcagcagctttagagaat
catttaatctccttaagtgatacttttttttgcagtggtgctgaagaaatcggagatgtc
gtcatccgatgctccagctatgagagaggcggacacggacaaatcaatctggaaaatgca
ttttctctatcctgcaattcctattttatccaattgggacggctggtaggtggaaaagaa
atactgtccatggcagaaaaaatgggtttgggccataaaacaggtatcgaacttcccgaa
gagattgcaggaaccttacccgatggtgattatatcaaaggcgccggaatcggaaatatc
tctatcggtcaagggacattagaagttacccctttgcaaatcgccagactaaccgccata
attgccaatgatggtgttgataatggtgtacacctgatccgccatattgtcgatgaatat
ggaaatatccttgaagattacagcaaaaccaatgcacaacgcgtgttatccccagatact
gcgacgcagcttcagcatatgatgcagaaagttgtagctgagggtactgcaagaaatagt
gatatgactgctgctattgatgccgcgggaaaaacaggatctgcagaagcggtctccgat
agaaagaataccgtccatgcttggtttaccggttatttcccatcgaaaaatccaaggtac
gctatcacagtggttgtagaagacggcggatctggcggcagaatcgctgcaccaaccttt
aaaaatatagcccgtagaattaatattttggaaaatgaaagcaattaa
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