KEGG   Geospiza fortis (medium ground-finch): 102033121Help
Entry
102033121         CDS       T03755                                 

Gene name
WBSCR17
Definition
(RefSeq) Williams-Beuren syndrome chromosome region 17
  KO
K00710  polypeptide N-acetylgalactosaminyltransferase [EC:2.4.1.41]
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr00512  Mucin type O-glycan biosynthesis
gfr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00512 Mucin type O-glycan biosynthesis
    102033121 (WBSCR17)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:gfr01003]
    102033121 (WBSCR17)
Enzymes [BR:gfr01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.41  polypeptide N-acetylgalactosaminyltransferase
     102033121 (WBSCR17)
Glycosyltransferases [BR:gfr01003]
 O-Glycan biosynthesis
  Mucin-type
   102033121 (WBSCR17)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Glycos_transf_2 Ricin_B_lectin Glyco_tranf_2_3 RicinB_lectin_2 Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID: 102033121
NCBI-ProteinID: XP_005425182
LinkDB All DBs
Position
Un
AA seq 595 aa AA seqDB search
LRRVKVLLVLNLIAVAGFVLFLAKCRPITTKSGDSYHDIHPRAEVANLTAHGISSIQDAV
LKRLSLLEDIVYRQLNGLSKSLGLIEGYGGRGKGGLPATLSPEEEEKAKGPHEKYGYNSY
LSEKISLDRSIPDYRPTKCKELKYGKDLPQISIIFIFVNEALSVILRSVHSAVNHTPAPL
LKEIILVDDNSDEEELKAPLEEYVNKRYPGLVKVVRNQKREGLIRARIEGWKAATGQVTG
FFDAHVEFTAGWAEPVLSRIQENRKRVILPSIDNIKQDNFEVQRYENSAHGYSWELWCMY
ISPPKDWWDAGDPSLPIRTPAMIGCSFVVNRKFFGEIGLLDPGMDVYGGENIELGIKVWL
CGGSMEVLPCSRVAHIERKKKPYNNNIGFYTKRNALRVAEVWMDDYKWHVYIAWNLPLEN
PGIDIGDVSERKALRKSLKCKNFQWYLDHVYPEMRRYNNTIAYGELRNNKAKDVCLDQGP
QENHTAILYPCHGWGPQLARYTREGFLHLGALGTTTLLPDTRCLVDTGKSRFPQLLDCDK
VKSSLHKRWSFIQNGAILNKGTGRCLEVENRGMAGIDLILRSCTGQRWTIKNFIK
NT seq 1788 nt NT seq  +upstreamnt  +downstreamnt
ttgaggagagtcaaagtcctgctggtgttaaacctgatcgccgtggctggcttcgtcctc
ttcctggccaagtgcagacccatcacgaccaagagcggcgactcctaccatgacatccat
cccagggcagaagtggccaacttgacagcacacggcatcagctccatccaggatgcagtg
ctgaagaggctctcgctcctagaagacatcgtctacaggcagctgaatggtctctccaag
tcccttggtctcattgagggctatggtggccgtggcaagggtggcctcccagccaccctg
tcccccgaggaggaggagaaagccaagggaccccacgagaagtatggctacaactcctac
ctcagtgagaagatttccctggaccgttccatcccggattatcgccccaccaagtgcaaa
gagctgaaatacgggaaggacctgccccagatctccatcatcttcatctttgtgaacgag
gcgctgtcggtgatcctgcgctcggtgcacagcgccgtcaaccacaccccggcccccctg
ctcaaggagatcatcctggtggacgacaacagcgacgaggaggagctgaaggcgccgctg
gaggagtacgtcaacaaacgctacccggggctggtcaaggtggtgaggaaccagaagagg
gaagggctgatccgggcccgcatcgagggctggaaggctgccacgggccaggtcaccggc
ttctttgatgcccacgtggagttcactgctggctgggcggagccggtgctgtcccggatc
caggagaacaggaagagggtgatcctgccctccattgacaacatcaagcaggacaacttc
gaggtgcagcgctacgagaactcagcccacggctacagctgggagctgtggtgcatgtac
atcagcccccccaaggactggtgggacgccggggacccctccctgcccatcaggaccccg
gccatgatcggctgctccttcgtggtgaacaggaaattctttggcgagattgggctgctg
gaccccggcatggacgtgtatggaggggagaacatcgagctgggcatcaaggtgtggctg
tgtgggggcagcatggaggtgctgccctgctccagggtggcgcacatcgagcgcaagaag
aagccctacaacaacaacatcggcttctacaccaagcgcaatgcgctgcgcgtggccgag
gtctggatggacgactacaagtggcacgtctacatcgcctggaacctgcccctggagaat
ccagggattgacattggtgatgtttctgagaggaaagccttgaggaagagcctgaagtgt
aaaaatttccagtggtacctggaccatgtttatccagaaatgaggagatacaacaacacc
attgcttatggagagctgcggaacaacaaggccaaggatgtgtgcctggaccagggccca
caggagaaccacacagcgatcctgtacccgtgccatggctggggcccccagctggctcgg
tacaccagggagggcttcctgcacctgggggccctgggcaccaccacgctgctgcccgac
acgcgctgcctggtggacacgggcaagagccgcttcccgcagctgctggactgcgacaag
gtcaagagcagcctccacaagcgctggagcttcatccagaatggagccatcctgaacaag
ggcacgggccggtgcctggaggtggagaacaggggcatggctggcattgacctgatcctc
cgcagctgcacggggcagaggtggacaattaaaaacttcatcaagtag

DBGET integrated database retrieval system