Geospiza fortis (medium ground-finch): 102035658
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Entry
102035658 CDS
T03755
Name
(RefSeq) hornerin-like
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
102035658
NCBI-ProteinID:
XP_014166851
LinkDB
All DBs
Position
Un
AA seq
1833 aa
AA seq
DB search
MSSVPGQGASGEQRGRARAGTSRGPRRFSRLEHDRHQFLQRLLQPSHAGKDARQSGDARS
GTRRLEEGDQKRWKVVAGRERAARGFLTDWDTGTAGAAKSGSGTAGTPGKGAGAAPGPAR
GAETGASALGKTSGTRGKHREHGGNIGNTGENIGITGEISGTRGNIGNTGKTSGSRGNIG
ITGENIGNTGKTSGSRGNIGITGENIGNTGKYREHGEISGTRGNIGNTGTTSGSRGQHRD
HGKISGTRGKHRDHGDNIGITGKHREHGENIGNTGKQREHGEISGTRGNIGNTGTTSGSR
GQHRDHGKISGTRGKHRDHGDNIGITGKYREHGENIGITGKYREHGENIGITGKYREHGE
NIGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITGKY
REHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIG
ITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREH
GENIGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITG
KYREHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREHGEN
IGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITGKYR
EHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGI
TGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREHG
ENIGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITGK
YREHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREHGENIGITGKYREPHPFT
ARCLRMQLPGVTVLSGCAIIVRGQPRGGPPPERQINLSNIRAGSLARRANASQPDSRDTP
DEPWGFPAREFLRKKLIGKEVCFTVEYKTPQGREYGMVYLGKDTSGENIAESLVAEGLAS
RREGIRANNPEQSRLAELEEQARSAKKGMWSEGTGSHTVRDLKYTLENPRHFVDSLHQKP
VNAIIEHVRDGSVVRALLLPDFYLVTVMLSGIKCPTFKREADSEVPEPFAAEAKFFTESR
LLQRDVQIVLESCHNQNILGTILHPNGNITELLLKEGFARCVDWSIAVYTRGADKLRAAE
RFAKERKLRIWRDYVAPTANLDQKDKQFVAKVMQVLNADAIVVKLNSGDHKTIHLSSIRP
PRLEGDSAQDKNRKLRPLYDIPYMFEAREFLRKKLIGKKVNVSVDYIRPASSATDTVPAF
SERTCATVSIGGINIAEALVSKGLATVLRYRQDDDQRSAHYDELLAAEARAIKNGKGLHS
KKEVPIHRVADISGDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLFLPKEXXXLGFLL
HGIECPRGARNVPGLTQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHIEG
VNLSVALVEQALSRVHFTAERSPYCKALLAAQDAAKQRKEKVWSHYEETPVEEVVPVLEE
KERTANYKPVFVTEITDDLHFYVQDVETGAQLEKLMENMRAEVGAHPPVEGSFVPRRGDF
CIAKFVDGEWYRARVEKVESGGKVHIFYIDYGNKETLPPSRLAPLPPAFSPRVLPPQATE
YTFAFIQVPQDEEARADAVDSVVRDIQNTQCLLNVEHLGPGCPHVTLQFADSKSDVGLGL
VKEGLVMVEPRKERQFQKVQGYCCMVQKATGLH
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgtccctggccaaggagccagcggggagcagcgaggccgggccagagccggc
acctcccggggaccccggcgcttctccaggttagagcacgatcgccaccaattcctgcag
cgattgctgcagccctcacacgcagggaaggacgctcggcagagcggggacgcccggagc
ggcacaaggaggctggaggagggagatcagaagcggtggaaggttgtggcaggcagggag
agggcggcaagaggattcctcacggactgggacactggcacagccggggcagcaaaatcc
gggagcgggacggccgggacccccgggaaaggggcgggggctgcaccgggacctgcgcgc
ggggccgaaacgggagcgagcgcgctcgggaaaacatcgggaacacgggggaaacatcgg
gaacacgggggaaacatcgggaacacgggggaaaacatcgggatcacgggggaaatatcg
ggaacacggggaaatatcgggaacacggggaaaacatcgggatcacggggaaatatcggg
atcacgggggaaaacatcgggaacacggggaaaacatcgggatcacggggaaatatcggg
atcacgggggaaaacatcgggaacacggggaaatatcgggaacacggggaaatatcggga
acacggggaaatatcgggaacacggggacaacatcgggatcacggggacaacatcgggat
cacgggaaaatatcgggaacacggggaaaacatcgggatcacggggacaacatcgggatc
acgggaaaacatcgggaacacggggaaaacatcgggaacacgggaaaacagcgggaacac
ggggaaatatcgggaacacggggaaatatcgggaacacggggacaacatcgggatcacgg
ggacaacatcgggatcacgggaaaatatcgggaacacggggaaaacatcgggatcacggg
gacaacatcgggatcacgggaaaatatcgggaacacggggaaaacatcgggatcacggga
aaatatcgggaacacggggaaaacatcgggatcacgggaaaatatcgggaacacggggaa
aacatcgggatcacgggaaaatatcgggaacacggggaaaacatcgggatcacgggaaaa
tatcgggaacacggggaaaacatcgggatcacgggaaaatatcgggaacacggggaaaac
atcgggatcacgggaaaatatcgggaacacggggaaaacatcgggatcacgggaaaatat
cgggaacacggggaaaacatcgggatcacgggaaaatatcgggaacacggggaaaacatc
gggatcacgggaaaatatcgggaacacggggaaaacatcgggatcacgggaaaatatcgg
gaacacggggaaaacatcgggatcacgggaaaatatcgggaacacggggaaaacatcggg
atcacgggaaaatatcgggaacacggggaaaacatcgggatcacgggaaaatatcgggaa
cacggggaaaacatcgggatcacgggaaaatatcgggaacacggggaaaacatcgggatc
acgggaaaatatcgggaacacggggaaaacatcgggatcacgggaaaatatcgggaacac
ggggaaaacatcgggatcacgggaaaatatcgggaacacggggaaaacatcgggatcacg
ggaaaatatcgggaacacggggaaaacatcgggatcacgggaaaatatcgggaacacggg
gaaaacatcgggatcacgggaaaatatcgggaacacggggaaaacatcgggatcacggga
aaatatcgggaacacggggaaaacatcgggatcacgggaaaatatcgggaacacggggaa
aacatcgggatcacgggaaaatatcgggaacacggggaaaacatcgggatcacgggaaaa
tatcgggaacacggggaaaacatcgggatcacgggaaaatatcgggaacacggggaaaac
atcgggatcacgggaaaatatcgggaacacggggaaaacatcgggatcacgggaaaatat
cgggaacacggggaaaacatcgggatcacgggaaaatatcgggaacacggggaaaacatc
gggatcacgggaaaatatcgggaacacggggaaaacatcgggatcacgggaaaatatcgg
gaacacggggaaaacatcgggatcacgggaaaatatcgggaacacggggaaaacatcggg
atcacgggaaaatatcgggaacacggggaaaacatcgggatcacgggaaaatatcgggaa
cacggggaaaacatcgggatcacgggaaaatatcgggaacacggggaaaacatcgggatc
acgggaaaatatcgggaacacggggaaaacatcgggatcacgggaaaatatcgggaacac
ggggaaaacatcgggatcacgggaaaatatcgggaacacggggaaaacatcgggatcacg
ggaaaatatcgggaacacggggaaaacatcgggatcacgggaaaatatcgggaacacggg
gaaaacatcgggatcacgggaaaatatcgggaacacggggaaaacatcgggatcacggga
aaatatcgggaacacggggaaaacatcgggatcacgggaaaatatcgggaacacggggaa
aacatcgggatcacgggaaaatatcgggaacacggggaaaacatcgggatcacgggaaaa
tatcgggaacacggggaaaacatcgggatcacgggaaaatatcgggaacacggggaaaac
atcgggatcacgggaaaatatcgggaacacggggaaaacatcgggatcacgggaaaatat
cgggaacacggggaaaacatcgggatcacgggaaaatatcgggaacctcaccccttcacc
gcccgctgcctccggatgcagctccctggggtcacagtgctgtcgggctgtgccatcatc
gtgcggggccagccccgcggggggccgcccccggagcggcagatcaacctcagcaacatc
cgcgcggggagcctggcacggcgcgccaacgccagccagcccgacagccgggacaccccc
gacgaaccctggggcttcccggcccgcgagttcctgcgcaagaagctgatcgggaaggag
gtgtgcttcaccgtggagtacaagaccccgcagggccgcgagtacggcatggtctacctg
gggaaagacaccagcggtgagaacattgctgagtccctggtggctgaaggactggcgtcc
cggcgggagggcatccgagccaacaaccccgagcagagccggctggccgagctggaggag
caggcccgcagcgccaagaagggcatgtggagcgagggcacgggctcgcacaccgtgcgc
gacctcaagtacaccctggagaacccgcggcacttcgtggactccctgcaccagaaaccc
gtcaatgccatcatcgagcacgtgcgggacggcagcgtggtgagggccctgctcctgccc
gacttctacctggtcaccgtcatgctctcgggcatcaagtgtcccaccttcaagcgcgag
gccgactctgaggtcccggagccgtttgcggccgaagccaaattcttcacggagtcccgg
ctgctgcagagggacgtgcagattgtcctggagagctgccacaaccagaacatcctgggc
accatcctgcacccgaacgggaacatcacggagctgctgctgaaggagggctttgcccgc
tgtgtggattggtccatcgccgtctacacccgcggcgccgacaaactgcgcgcggccgag
aggtttgccaaggagcgcaagctgcggatctggagggattacgtggcccccacggcaaac
ctggatcagaaggacaaacagttcgtggccaaggtgatgcaggtgctcaacgccgacgcc
atcgtggtgaagctcaactccggggaccacaaaaccattcacctgtccagcatccggcca
ccccggctcgagggggacagcgcccaggacaagaacaggaagctgaggcccctctacgac
attccctacatgttcgaggcccgggaattcctgcgcaagaaactcatcgggaagaaggtg
aatgtttccgtggattacatccgccctgccagcagcgccaccgacaccgtgccggccttc
tcggagcgcacctgtgccaccgtctccatcggcggaatcaacatcgcggaggcgctggtc
agcaagggcctggccacggtgctgcgctaccggcaggacgacgaccagcgctcggcgcac
tacgatgagctgctggcagctgaggccagggccatcaagaacgggaaagggctgcacagc
aagaaggaggtgccgatccacagggtggccgacatctccggagacacgcagaaggcgaag
cagttcctgcccttcctgcagcgcgccggccgctccgaggccgtggtggagtacgtgttc
agcggctcccgcctcaagctcttcctgcccaaggagnnnnnnncattgggattcctgctc
catgggatcgagtgcccgcggggtgcccggaacgtgccggggctgacgcaggagggggag
cccttcagcgaggaggccacgctcttcaccaaggagctcgtgctgcagagggaggttgag
gtggaggtggagagcatggacaaggccgggaatttcatcgggtggctgcacatcgagggc
gtgaacctgtcggtggcgctggtggagcaggcgctgtcccgcgtgcacttcacggccgag
cgcagcccctactgcaaggccctgctggccgcccaggacgcggccaagcaaaggaaggag
aaggtgtggtcccactacgaggagacgccggtggaggaggtggtgccggtgttggaagag
aaggagcgcacggccaactacaaacctgtgttcgtcaccgagatcaccgacgacctccac
ttctacgtgcaggacgtggagacaggcgcccagctggagaagctgatggagaacatgcgc
gccgaggtgggcgcccacccgcccgtggagggctccttcgtcccgcgccgcggcgacttc
tgcatcgccaagttcgtcgacggggaatggtaccgtgcccgagtggagaaggtggagtca
ggtggcaaagtgcacattttctacattgactacggcaacaaggagacgctgccccccagc
cgcctggccccgctgcccccggcgttctccccgcgggtgctgccgccccaggccaccgag
tacacctttgccttcatccaggtgccacaggacgaggaggcgcgggcggacgccgtggac
agcgtggtgagggacatccagaacacgcagtgcctgctcaacgtggagcacctggggccc
ggctgtccccacgtcaccctgcagttcgctgactccaagagcgacgtggggctggggctg
gtcaaggaggggctggtgatggtggagccccgcaaggagaggcagttccagaaagtgcag
gggtactgctgcatggtacagaaggccactgggctccactga
DBGET
integrated database retrieval system