Geospiza fortis (medium ground-finch): 102039129
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Entry
102039129 CDS
T03755
Gene name
APAF1
Definition
(RefSeq) apoptotic peptidase activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04115
p53 signaling pathway
gfr04210
Apoptosis
gfr05164
Influenza A
gfr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102039129 (APAF1)
04115 p53 signaling pathway
102039129 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102039129 (APAF1)
05168 Herpes simplex virus 1 infection
102039129 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NB-ARC
APAF1_C
ANAPC4_WD40
CARD
Ge1_WD40
eIF2A
WD40_like
CARD_2
Nup160
AAA_16
DUF2415
RAB3GAP2_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
102039129
NCBI-ProteinID:
XP_005421670
UniProt:
A0A6I9HJ13
LinkDB
All DBs
Position
Un
AA seq
1249 aa
AA seq
DB search
MDVKSRNYLLMNREALENDIKTSYIMDRMISDEVLTLQEEERVRQQNTRKERAAMLINII
LSKDNNSYRSFYNALLHEGYRDLAALLQDGIPSVSSGNRKSSMDGMNSYVKTILCEGGVP
QRPVVFVARPKLVDAIKKKLYCLGSNPGWVTVYGMAGCGKTVLTAEALRDPQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGNKYEVHVGSGLAHEKGLEILSLFVN
MKISELPEQANSLVRECKGSPLVISLIGALLRDFPSRWEYYLRQLQNKQFRRIRKSSFYD
YEALDEAMSISVEQLDDNYKDYYKDLSVLPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVLSQEDC
MYWYNFLAYHMAGAKMQQELRDLMFSLDWIKAKTELVGPAHLIHEYVEYSSALDQKDSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGTFYLEWVNKKS
LKNLYRLVVRPHRDAVYHACFSKDRQRIASCGADKTLQVFKAESGERLLEINAHDDEILC
CAFSADGEFVATCSSDKKVKVWNSRTGQCRCVYEEHSEQVNCCQFNNKSGQYLLATCSND
TFIKIWDLNGKYCRNTMIGHENSVNHCRFSPNDEYVASCSTDGTVKLWEARSGNELKSIE
IKDFFKNADEQPDDVEVLVKCCSWSRNGNMILVAAKNKLLLFDINTCGLLTQVIVSHHST
IQYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSD
DQTIRIWETKKVCQSSDAVLKSELDVVFHNGEVMILAIYNQKNLQLINGNTDNVIMQTAA
QESPISCCCLSEDLKFAAFGQESGTIKVLQLSDGKVLKSWEAYRTSVQHCQFTTDCQTLI
SSAHDSVIQIWNWQLSECVFLRGHKEAIKDFRLLENSKLLSWSFDGTVKVWNITTGNPEK
DFACHGGAVLSCAVSPDGSKFSSASADKTAKIWSFESSSVLHELKDHEACVRCCTFSPNN
KLLATGDDKGEIRIWDVLTGALLHFCSPVTVDEGEPTHGGWVTDLSFSPDSKMLVSSGGY
LKWWNVTTGESLQTFYTNGTNLKSIYVSPNFKVYVTVDNLGILYVLQKF
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaagagtagaaactatttgcttatgaatcgtgaagcactggaaaatgacatc
aagacttcttatattatggatcgtatgatttctgacgaagtactgacattacaggaggag
gagagagtgaggcaacagaatacccggaaggagcgagcagctatgctaataaacattatt
ctttcaaaagataataattcatatagatccttttataatgcactgctccatgaagggtac
agagatcttgctgcacttcttcaggatggcatcccttctgtctcgtctggtaacagaaag
agttcaatggatggaatgaattcctatgtgaagaccattctctgcgaagggggtgtgcca
cagagaccagttgtgtttgtcgctcgaccaaaactggtagatgctattaaaaagaaactg
tactgcttgggaagtaacccgggttgggtcacagtttatggaatggcaggctgtgggaag
actgttttaacagcagaagctttaagggatcctcagctcttggaagattattttccagga
ggagttcactggatctctgttgggaagcaggacaaagcagggctgctcataaaacttcag
aatctctgcagtagattggaacatgactccactctttcacaaaggccaccattgaacatt
gaggaggctaaagatcgtcttcgtttgctgatgttgcgcaaataccccaggtctcttttg
gtcctggatgacatttgggattcgtgggtgttaaaagcatttgataatcaatgtcaggta
ctgatcacaagcagggacaggagtgtaacagatgctgtggccggcaataaatacgaggtt
catgtgggaagtggactagcacatgagaaaggactggagattttatccctgtttgtgaat
atgaaaatatcagaacttccagaacaagctaactctcttgtaagagaatgcaaaggttct
cctctcgtgatatccttgataggtgctttactccgagacttcccgagccgctgggaatac
tatctcaggcagctgcagaataaacagtttagaagaataagaaaatcttccttctatgat
tacgaagcccttgatgaagcaatgtccataagtgttgagcagctggatgacaattacaaa
gattactataaagacctctctgtcctcccaaaagatgttaaagtacctactaaggttctc
tgtattctttgggatatggaaactgaagaagttgaagatatactacaggaatttgttaac
aaatcactgttgttctgtgatcgtaatgggaagtcattccattattatttacatgatctt
cagcttgactttctcacagagaagaaccgcaaccagcttcaggagttacataaaaacata
gtaaatcagtacaagaaatactacaagcttaatacacctgttctgtctcaagaggattgc
atgtactggtataactttctagcatatcacatggcaggtgccaaaatgcagcaggagctc
cgtgatcttatgttttctttagattggattaaagctaaaacagaattggtggggcctgct
cacctgattcatgaatatgtagaatatagttcagccctggatcaaaaggatagtacagtg
cgtgagaatttccaggagtttctgtccttaaatgggcaccttcttggccggcagccgttt
cctgacatcatccagttgggtctttgccagccagagacatcagaggtgtatcaacaagcc
aagctgcatgctcaaagggaaacaggaacattttatctggagtgggtaaataaaaaatcc
ttgaaaaatctctaccgtctggttgttcgcccgcatagagatgcagtttaccatgcctgc
ttttctaaggacagacaaagaatagcatcatgtggagctgataaaactcttcaggtgttt
aaagcagaaagtggagagagactcctagagataaatgcccacgatgatgaaatactctgt
tgcgctttttctgctgatggtgaatttgtagcaacttgttcaagtgataaaaaagtcaag
gtgtggaattcaagaacaggccagtgtaggtgtgtgtatgaagagcactctgagcaggtc
aattgctgccagttcaataacaaaagtggtcagtaccttctggccacctgctcaaatgac
actttcatcaaaatttgggatttgaatggaaaatactgtagaaataccatgataggtcat
gaaaattctgtcaatcactgcagattttcaccaaatgatgaatatgttgctagctgctcg
acagatggaacagtaaagctttgggaagcacgctcaggaaatgaactgaaaagcattgag
ataaaagatttctttaaaaatgcagatgaacaaccagatgatgtggaggttttagtaaaa
tgttgctcttggtccagaaatggtaacatgattttggtggcagccaaaaataagcttttg
ctttttgacatcaacacctgtggtttgttaactcaagtcattgtcagtcatcacagcaca
atccaatactgtgacttctgtcctggggatgaattagtagcagttgctttgtctcactgc
tcagttgagttatggaatattaagtctttatcaaaagtggcatattgcagaggacacatg
agctgggttcactgtgtgacattttcaccagatggatctttatttctgacttcatctgat
gaccagacaatacgtatctgggaaacaaagaaggtgtgccagtcttctgatgctgtgctg
aagagtgaactggatgttgtgtttcacaatggtgaagtgatgattttagccatctacaat
cagaagaatttacaacttatcaatggaaacacagacaacgttattatgcagacagcagct
caagaatcccccatttcctgctgttgcttaagtgaagatcttaaatttgcagcttttgga
caggagagtggaacaataaaggtactacagttatcagatgggaaggttctgaagtcctgg
gaggcctacaggacatctgtgcagcactgtcaatttacaaccgactgtcagactctcatc
tcaagtgctcatgattcagttatacagatatggaattggcaattgagtgaatgtgtgttc
ctaagagggcacaaggaagcaatcaaggattttagacttctggaaaattcaaaacttctc
tcttggtcattcgatggaaccgttaaggtttggaatatcactactggaaacccagaaaaa
gattttgcttgtcatggaggtgctgttctttcctgtgctgtttcacctgatggtagtaaa
ttttcatctgcttctgctgacaaaactgcaaagatatggagctttgaaagttcatctgtt
cttcatgaactgaaggaccatgaagcctgtgtgcggtgctgcactttctctcctaataac
aaactgctggccactggagatgacaaaggagaaataaggatttgggatgttttaacaggt
gcattacttcatttctgctccccagttactgtagatgaaggagagccaacacatgggggt
tgggtaacagacctctccttttctcctgacagtaaaatgcttgtgtcatctggaggctat
cttaagtggtggaatgtaactactggagaatccttacaaaccttctacacaaatggaaca
aacctcaagtcaatatatgtgtcccctaatttcaaagtatatgtgactgttgataatctt
ggcattctttatgtactacagaagttctga
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integrated database retrieval system
