Geospiza fortis (medium ground-finch): 102039715
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Entry
102039715 CDS
T03755
Gene name
TSC2
Definition
(RefSeq) tuberous sclerosis 2
KO
K07207
tuberous sclerosis 2
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04115
p53 signaling pathway
gfr04140
Autophagy - animal
gfr04150
mTOR signaling pathway
gfr04218
Cellular senescence
gfr04910
Insulin signaling pathway
gfr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
102039715 (TSC2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102039715 (TSC2)
09143 Cell growth and death
04115 p53 signaling pathway
102039715 (TSC2)
04218 Cellular senescence
102039715 (TSC2)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
102039715 (TSC2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102039715 (TSC2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gfr01009
]
102039715 (TSC2)
Protein phosphatases and associated proteins [BR:
gfr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102039715 (TSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Cnd1
Telomere_reg-2
Motif
Other DBs
NCBI-GeneID:
102039715
NCBI-ProteinID:
XP_014164519
LinkDB
All DBs
Position
Un
AA seq
1767 aa
AA seq
DB search
MAKPQSKDSGLKEKFRNLLGLGTSRGSSKSSEGKQTEFIITAEILKELSIECGLSNRIRA
ISQICEVAKTKKIEEHAVEAVWKVVADMLQPERPAEARHAVLHLLKSIVQGQGERLGILR
AHFFKVIKDYPSNEDVHERLEVFKALTENGRYITYLEEELADFVLQWMDVGLTSEFLLVL
VNLVKFNSCYLEDYVADMVHKICLLCIQTSSSMDIEISLQVLDAVVCYNCLPSENLPVFI
ITLCRTINVKELCEPCWKLMRNLLGTHLGHSAIYNMCRIMEDRSYMADAALLRGAVFFVG
MALWGAHRLNSLRNSPTSVLPSFLKAMTCPNAVVSYEIVLSITRLIKKYGKGLQAVTWDI
LLDIMERLLQQLQVLESQELKSIVHDLLTTVEELCDQNDFHGSEERFFELVERCADQRPE
SSVLNLITYRAQSIHPAKDGWIHNLQLLMERFFRNESRSAVRIKVLDVLSFVLSINRQFY
EEELINLVVISQLAHIPEDKDHQVRKLATQLLVDLAEGCNTHHFNSLLDIIEKVAAHSLS
SPSELEERDLLSYSASLEDVKTAVLGLLIILQTKLYSLPSSHAMRVYEMLIQHVQRHYKY
CYSLPVASSIRLDSSVFPAAGVXLLMLRADSLHRLGLANKDGAVRFSPYCLCDFVEAEKR
ASEKKPPGTLSPPSGSPSVPSQGGTVRVGHLPYSMVFGVLLQCLKQETDWKVLKLVLNKL
PESLRYKVLFLTSPCNIDQLASALSYMLTDKKTTDRLHGTPEGFSRTDLHLAVVPVLTAL
ISYHNYLDKAKQREIVYCLEHGLIYRCANQCVVALSVCSVEMPDIIIKALPVLIVKLTHI
SATANMAIPLLEFLSTLARLPHLYRNFAAEQYASVFAISLPYTNPSKFNQYIVCLAHHVI
AMWFIRCRLPFRKDFVPYITKGLRSNVLLSFDDTPEKDSFRARSTSLNERPKSLRLAKNA
KQGLNNSPPVKELKEPSAVDAFRSRSISVSEHVVRSRIQTSITSSSLGSADENSMAQADD
NLKNLHLELTETCLDMMARYVFSNFTAVPKRSPVGEFLLAGGRTKTWLVGNKLVTITTSV
GTGTRSLLGLDSGEFQSTPESSSDPVLQVRQTKEAPAKLESQPGQQVCRSSRNRVRSMSG
GHALRVGALDSSASHFPSGSTSQGTQGPPAAAARPEKASPAPQTALQKEKANLAAYVPLL
TQGWAEILVRRPTGNTSWLMSLENPLSPFSSDINNMPLQELSNALMAAERFKEHRETALY
KSLSVPSSSLATGTAKPSLLQRSNTESAVVLEEGSPGDMELREAESPAESPESEDVDTSC
SEHVLSEERFGKAQDSYSRSSSTSSQEEKSLRSEELSEGGIPIGREEGRALEELSFQPSQ
PLSKSSSSPELQTLQEVLKDANGREVPRRLSTEVKSKSQSGNLEGEGLGGWLGRGEDGRA
AGQGAGAAAATSPRSPSGHRPRGDTISDPDFSLLLSFSFVFLQLYHSPFFGDENNKPLLL
PNETFERSVQLLDQIPSYDTHKIAVLYVGEGQSNNEIAILSNEHGSYRYTEFLTGLGKLI
ELKDCQPDKIYLGGLDVCGEDGQFTYCWHDDIMQAIFHIATLMPTKDLDKYRCDKKRHLG
NDFVSIVYNDSGEDFKLGTIKGQFNFVHVIITPLDYDCNLVTLQCRKDMEGLVDTSVAKI
ISDKNLPFVARQMALHANMASQVHHSRSNPTDTYPSKWIARLRHIKRLRHRLREETQYQS
PGLPLQLHPSAPTNPPPQIPQDTPPSY
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctcagagcaaggattccgggctgaaggagaagttcaggaacctcctgggg
ctgggaacatcccggggaagctccaagtcgtcggagggcaagcagacagagtttatcatc
actgcagaaatactcaaggaactgagcatagagtgtggactgagtaacaggatacgagca
atcagtcaaatttgtgaagtggcaaaaaccaaaaaaattgaagagcacgccgtggaggct
gtgtggaaggtggtggctgacatgctgcagcccgagcgtcccgccgaggccaggcacgcc
gtgctccacctgctcaagtccatcgtccagggacagggtgagaggctggggatcctcaga
gcccacttttttaaggttattaaggattatccctccaatgaagatgtgcatgagcggctg
gaagtgttcaaggctctgacggagaacgggcgctacatcacctacttggaggaggagctg
gcggattttgtgctgcagtggatggatgttgggctgacgtctgagttcctcctggttctg
gtgaacctggtgaaattcaatagctgctacctggaagactacgtagctgacatggtccac
aagatctgcctcttgtgcattcagacttcatcgtctatggacatagagatttccttgcaa
gtcctggatgcagttgtttgttacaactgcctgccctcggagaacctgcccgtgttcatc
atcaccctgtgccgcaccatcaacgtgaaggagctctgtgagccctgctggaagctcatg
cgcaacctcctgggaacccacctgggacacagtgccatctacaacatgtgcaggatcatg
gaagacagatcctacatggcagatgcagccctgctgagaggagctgtgttctttgttggg
atggctctgtggggggctcatcgcctcaattccctcaggaactcccccacttcagtgctg
ccttcattcctcaaggccatgacctgtcccaacgcagtcgtgtcctacgagatcgttctg
tccatcacacgcctgatcaagaaatatggcaaggggctgcaggctgtcacctgggatatc
ctcctggacatcatggagagactgctgcagcagctgcaggttctggagagccaagaactg
aagtccattgtacatgatcttctgaccacagtagaagagctctgtgaccagaatgatttt
catggctctgaagagagattttttgagctggtggaaagatgtgctgatcagagaccagaa
tcttctgtgttaaacctgataacgtacagagctcagtccatccaccctgccaaagatggc
tggatccacaacctgcagctcctaatggagagattcttcaggaacgagagccgtagtgct
gttaggattaaggttctggatgtgctgtcctttgtgctgagcatcaacagacagttctat
gaggaagagctgataaacctggtggtgatctcccagctggctcacatcccagaggacaaa
gaccatcaggtccgaaaattggccactcagctgctggtggacctggctgaaggctgcaac
actcaccacttcaacagcctgctggatatcatcgagaaggtggctgcacattctctgtca
tctccttctgagctggaagagagggaccttctgtcatattcagcttctctggaggatgtc
aagacagcagttcttgggctcctgataattcttcagaccaagctgtacagtttgccctcc
agccacgccatgcgcgtgtacgagatgctgatccagcacgtgcagcgccactacaagtac
tgctacagcctgcccgtggccagcagcatcaggcttgactccagtgtgttccctgctgct
ggtgtttgattgctgatgctccgagctgactccctgcaccgcctgggccttgccaacaag
gatggagcagtgaggttcagcccctactgcctctgtgactttgtagaggcagagaaaagg
gcttctgagaaaaagccccctggcaccctgtccccaccttcaggcagccccagtgtgcct
tcccagggtggcactgtccgggtgggacacctgccctactccatggtctttggggtcctc
ctgcagtgtttgaagcaggagacagactggaaggtgctgaagttggttctcaacaaatta
cccgagtctctccgctataaagtgctatttttaacttctccttgcaacatagaccagctg
gcctctgcactgagctacatgctcacagacaagaagaccacggacaggctccacgggacc
cccgaaggcttttcccgcacggatctgcacctggctgtggtccccgtgctgacagcgctg
atatcttaccacaactacctggacaaagccaagcagcgagagatcgtgtactgcctggag
cacgggctcatctaccgctgtgccaaccagtgcgtggtggcactgtcagtctgcagcgtg
gagatgcccgacatcatcatcaaggcactgcccgtcctaattgtcaaactcacccacatt
tctgccacggccaacatggcaatccctctgctggaatttctctcaactctggccaggctg
cctcacctgtaccggaacttcgcggcagagcagtacgccagcgtcttcgccatctccctg
ccctacaccaacccctccaagtttaaccagtacatcgtttgcctggcccaccacgtgatc
gccatgtggttcatccgctgccgcctgcccttccgcaaggactttgtcccctacatcacc
aagggcctgcgctccaacgtgctcctgtccttcgatgacaccccagagaaggacagcttc
agggctcgcagcaccagcctcaatgagaggccaaagagtttaagactagccaaaaatgca
aagcaaggcttgaataactctcctccagtgaaagagctgaaagaaccctctgcagttgat
gccttccgatcccgcagcatcagtgtgtctgaacatgtggtccgcagccgcatccaaacg
tccatcaccagctccagcctgggctctgcagatgaaaactccatggctcaggctgatgac
aacttgaaaaacctgcacctggagctgacagagacctgcctggacatgatggctcgatac
gtcttctccaacttcaccgctgtgcccaagaggtctcccgtgggggagtttctgctggct
ggaggaaggaccaagacctggctggttggtaacaagctggtgaccatcactacaagtgta
ggaacagggacaaggtccctgcttggcctggactctggagaattccagagcaccccagaa
tcaagctcagaccctgttttgcaagtgagacagaccaaggaggctccagccaagctggaa
tcccagcctgggcagcaggtttgcaggagctcccgcaacagagtccgatccatgtcgggt
ggtcatgccttacgtgttggtgccttagacagctcagcctcccattttcccagtggctca
acttcccaagggacgcagggccctcctgctgctgcagcccgcccagagaaggccagtcct
gctccacagacagccctgcagaaggaaaaagccaacttggctgcctacgtgccactgctg
acccagggctgggcagagatcctggtgcgcaggcccacaggcaacacgagctggctgatg
agcctggagaacccgctgagccccttctcctctgacatcaacaacatgcccctgcaggag
ctctccaacgccctgatggctgcagaacgcttcaaggagcaccgggagacggctctgtac
aaatccctgtccgtgccctcctccagcctggccacgggcacggccaagccctcgctgctg
cagcgctccaacacagaatcggccgtggtgctggaggagggcagcccgggcgacatggag
ctcagggaggccgagtcccccgccgagtcccccgagagcgaggacgtggacacctcgtgt
tctgagcacgtgctgagcgaggagaggtttggaaaagcccaggactcgtacagcaggtcc
tcctcgacgtccagccaggaggagaagtcgctgaggtcggaggagctgtcggagggcggg
atcccgatcgggcgtgaggagggccgggcgctggaggagctctccttccagccctcacag
cccctcagcaagtccagctcctccccggagctgcagacgctgcaggaggtgctcaaggac
gccaacgggcgggaggtgccgcggaggctgagcacggaagtgaaatccaaatcgcagtcg
gggaacctggaaggggaagggctgggcggctggctgggccgcggcgaggacggcagggcc
gccgggcagggcgctggcgccgcggctgccacctcgccccgctcgccctcgggccaccgg
ccgcggggcgacaccatctccgacccagacttctccctccttctctccttcagctttgtg
tttttacagttgtaccactcccccttctttggtgatgaaaacaacaaacccctcttgttg
ccaaatgagacatttgagaggtcagtgcagctcctggatcagatcccatcctatgacaca
cacaagattgcagtgctctacgttggggagggccagagcaacaacgagatcgccatcctg
tccaacgagcacggctcctaccgctacaccgagttcctcacgggcctgggcaagctcatc
gagctcaaggactgccagccagacaagatctacctgggtggcctggacgtttgtggggag
gatggacagttcacctactgctggcacgatgacatcatgcaagccattttccacattgct
actctgatgcccacgaaggatttggataaataccgctgtgacaagaagaggcacctgggg
aatgattttgtttccattgtttacaatgattctggagaggatttcaaactgggcacaata
aaggggcagttcaattttgtgcatgtgatcatcacccccctggactacgactgtaacctg
gtgacgctgcagtgccggaaagacatggagggtctggtggacacaagtgttgccaagatc
atctctgacaagaatctgcccttcgtggcccgtcagatggccctgcacgccaacatggct
tcccaggtccaccacagcagatccaaccccacggacacctacccctccaaatggatcgcg
aggctgcgccacatcaagaggctgcggcaccggctccgtgaagaaacacagtaccagagc
cctggccttcccctgcagctgcacccctctgcccccacaaacccccctccccagatcccc
caggacacccctcccagctat
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integrated database retrieval system