Geospiza fortis (medium ground-finch): 102042935
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Entry
102042935 CDS
T03755
Name
(RefSeq) structure-specific endonuclease subunit SLX1-like
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
102042935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102042935
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102042935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-GeneID:
102042935
NCBI-ProteinID:
XP_014167077
LinkDB
All DBs
Position
Un
AA seq
176 aa
AA seq
DB search
MAAMRAVYLLRSAAPRGRCRGRTYVGFTVDRGGGLPRRRRRQHNGGREMELFVHGFPSDV
AALRFEWAWQHPNSSRCLLVPPTRRPREQPISFALRLLPRLLLAPPWNRLPLRIRWLRPP
PPHGRGFKGGRVQRGLIRCHTHLLWGDLIRRCLGEAEPEEEWAEPDDIIIPSSAPT
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggcggctatgagggcggtgtatttgctgcgctccgccgctccccggggccggtgccgg
ggccgaacttacgttgggttcacggtggatcgcggcggggggctcccgcgccggcgccgc
cggcagcacaacgggggaagggaaatggaacttttcgtccacggcttcccctccgacgtc
gccgccctcaggtttgagtgggcgtggcaacacccaaactcctcccgctgcctcttggtt
ccgcccactcgccgcccccgggagcagccaatcagcttcgccctccgcctcttgccccgc
ctccttttggccccgccctggaaccgcctcccgctgaggatccgttggctccgcccaccc
cccccccatgggaggggatttaaagggggaagagttcagaggggtttaattaggtgccac
acccacctcctgtggggagatctgattcgccgctgcctgggagaggcggaacctgaagag
gaatgggcggagcctgatgacatcatcatcccaagctccgcccccacatga
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