Geospiza fortis (medium ground-finch): 102043110
Help
Entry
102043110 CDS
T03755
Symbol
OTUD4
Name
(RefSeq) OTU deubiquitinase 4
KO
K13718
OTU domain-containing protein 4 [EC:
3.4.19.12
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102043110 (OTUD4)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102043110 (OTUD4)
Peptidases and inhibitors [BR:
gfr01002
]
Cysteine peptidases
Family C85
102043110 (OTUD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OTU
Motif
Other DBs
NCBI-GeneID:
102043110
NCBI-ProteinID:
XP_005418267
LinkDB
All DBs
Position
Un
AA seq
891 aa
AA seq
DB search
MACVDYLRKNREKFEAFIEGPFEDYLKSLENPQEWVGQVEISALSLMYKKDFIIYQEPNA
SPSRVTENGFSDKVLLCFSNGNHYDIVYPIEYAEKAALCQSLLYELLYEKVFDMDVKKIM
AELSAVGVAEESNGSSEVSASDSEDDNYRSKATTVSDMNGMKSLSGNKHVESNGNPTSLV
LPKKVLKSLDPLVYRNIEYDVWLRSRWDQQKQDFSIAAGMQYSIGDKCKVRLDHNGKFYN
AHIQEVYSENGPVVVFVEELGAKXVLNLFWKGNQLVCQAATQTVDNVNQKKFSNTERRNS
KWTVEVEEQKEKESNSRQIHLSQKLEPNSSEKNSQDESYPKASPPLEQVKTDSPILAEQN
LTECLPSVTPTPSPVFSEVHLPPAVPSVPAIVPAWPSEPATYGPAGIPTQIPASSLMPGP
ATGPDSIVSQAQTLNPYQDPLYPGFPFNEKGERAVAPPYSLCSTGDDLPKDKNILRFFFN
LGVKAYSCPMWAPHSYLYPLHQAYLAACRMYPNVSLPVYPHNPWFQEAAPAQNENETARP
NRHFAVQTEARSNGQIPQVDRSPSLPLIIPSAQVTESQGQVCVEPENPAQALHANYDESL
RGKNMFPQPPFGHNHFLGAVPIAPPFFPHFWYGYPVQGFIENSVARPNLVLSPEDKEAAA
GTSASMYVGKECSPPVPGVNCAEQLQKTNSVSGSNTVPFPVAAAGTPKDTSARAPQLEQT
CPAAPKQKAGGQQHRPPQTQGPERPTAGPSTQALLAEPPKSELKAGTPSRKERPAKGRES
KGTGSVQTESRAQRTREESSEDDTEVSDMLRSGRSKQFYNQTYGGGRRPRPDRGYSSRGG
YQFQRNEEAWKGPPSRSRDDGYQYQRNFRGQPYRNDRRRAALGDNQRGQQA
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtgtagactatcttcggaaaaatagggagaaatttgaagcattcatagagggg
ccatttgaagattatttaaaaagtttggaaaatccgcaggaatgggttggacaagtagaa
ataagtgccctttctcttatgtacaagaaagatttcataatataccaggagccaaatgct
tccccttcacgtgtaactgaaaatggcttttctgataaggtattgctgtgcttctcaaat
ggaaaccactatgatattgtgtatcccatagagtatgcagagaaggctgctctatgccag
tctctgctgtatgagttgctctatgagaaagtgtttgatatggatgtaaagaaaatcatg
gcagaacttagtgctgttggtgtggcagaggaaagtaatgggagcagtgaagtgtctgct
tcggattcggaagatgacaactacagaagtaaagctacaacagttagtgatatgaatgga
atgaagtctctttctggcaacaagcacgttgagagcaatgggaatcccacctcgctggtg
ttgcctaaaaaggttctgaaatcacttgatcccttggtttacagaaacattgaatacgat
gtttggctccgatctagatgggatcagcaaaaacaagatttttctatcgctgctggcatg
caatactccattggagataaatgtaaagtgcgcttagatcataatgggaaattttataat
gcccatattcaagaagtttattcagagaatgggccagttgttgtatttgtagaagagctt
ggagcaaagtgagtgcttaatcttttttggaagggaaaccagttagtctgtcaggctgct
acacagactgtggataatgtaaaccagaaaaagttctcaaacactgaaagaagaaacagc
aagtggacagtagaggtggaagagcagaaggagaaagagtcaaattccaggcagatccac
ttaagtcagaagcttgagccaaattcatctgagaagaatagtcaagatgagagttatcca
aaagcttcacctcctttggaacaagtaaaaacagattctccgattcttgctgagcaaaac
ctgactgagtgcttgcccagcgtaactccgacaccctctccagtcttctctgaggtgcat
ttacctccagcagtgccttctgtaccagccattgtgccagcttggccaagtgagccagca
acatacggaccagcaggtattccaacccaaatacctgcttcttcactgatgccaggacca
gccacgggacctgactctattgtatcacaggctcagactctgaatccctaccaggatcca
ctctaccccggattcccttttaatgaaaagggagaaagagccgttgcacctccttactcc
ctgtgcagtactggggatgacttacctaaagataagaatattctgagatttttcttcaat
cttggtgtgaaggcatacagttgtcccatgtgggcaccccattcttacctgtaccccctg
caccaggcctatttagctgcttgtagaatgtacccaaacgtgtcccttcctgtgtatccg
cacaacccctggttccaggaggctgctcctgctcagaacgaaaacgaaactgcacgacca
aacaggcattttgctgtccagaccgaggccaggtccaatggtcagattccacaggttgac
agatctccatcactgcctctgatcataccttcagctcaggtgacggaaagtcaaggacag
gtctgtgtcgaaccggagaatccagcgcaggctcttcatgccaactacgacgagtccctg
agagggaaaaatatgttcccgcagccgccctttggacacaatcactttctaggagctgtt
ccaatagcacctcctttctttcctcacttctggtatgggtacccagttcagggtttcatt
gagaattcagtagcgagacctaaccttgtcttgtctcctgaggacaaagaggcagcagct
ggcacctctgccagcatgtacgtgggcaaagaatgcagccctccagttcctggagtgaac
tgtgcagagcagctccagaagaccaacagtgtcagcggctccaataccgtcccattccca
gtggctgctgcagggaccccgaaagacacttcagccagggcacctcagctggagcaaacc
tgtcctgctgctcctaagcagaaagcaggcgggcagcagcatcgccctccacagacacag
ggtccagagaggccgacagcagggcccagcacgcaggcactgctggcagaacctcccaaa
agcgaactgaaagccggcactcccagccggaaggagaggcctgctaaagggagagagtcc
aagggcactgggagcgtgcagacggaaagcagggcccagagaacaagggaggagagctct
gaagatgacacggaggtttccgacatgctgaggagtggcaggtccaagcagttctataac
cagacttatggaggaggcagaaggcccagacctgacaggggttattccagcaggggagga
taccagttccaaagaaatgaggaggcctggaaaggaccacccagcagaagcagagatgac
ggctaccagtatcagagaaactttagagggcagccatataggaacgacaggagaagggca
gcactgggagataatcagagggggcagcaagcataa
DBGET
integrated database retrieval system
