Geospiza fortis (medium ground-finch): 102043414
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Entry
102043414 CDS
T03755
Symbol
CHSY1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
gfr01100
Metabolic pathways
Module
gfr_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
102043414 (CHSY1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gfr01003
]
102043414 (CHSY1)
Enzymes [BR:
gfr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
102043414 (CHSY1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
102043414 (CHSY1)
Glycosyltransferases [BR:
gfr01003
]
Glycan extension
O-Glycan
102043414 (CHSY1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
102043414
NCBI-ProteinID:
XP_014163820
UniProt:
A0A6I9ZB18
LinkDB
All DBs
Position
Un
AA seq
652 aa
AA seq
DB search
MMLKYMHDHYLDKYEWFMRADDDVYIKGDKLENFLRSLNSSEPLFLGQTGLGTTEEMGKL
ALEPGENFCMGGPGVIMSREVLRRMVPHIGECLREMYTTHEDVEVGRCVRRFAGVQCVWS
YEMQQLFYENYEKNKKGYIRDLRNSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRHR
TVQLHREIVLMSKYSNTEIHKEDLQLGMPPSFMRFQPRHREEILEWEFLTGKYLYSGADG
QPPRRGMDSSQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYVLD
LLLLYKKHKGKKMTVPVRRHAYLQQTFSKIQFMEHEEMDAKELASKINQDSGSLSFLSNS
LKMFVPFQLSRSKAERKELKDKKINILIPLSGRFDMFARFMGNFEKTCLIPNQNVKLVVL
LFNSNSNPDKAKQIELMRDYRSKYPKADMQVLPVSGEFSRALALEVGSSQFQNESLLFFC
DVDLVFTTEFLQRCRANTVLGQQVYFPIIFSQYDPKIVYNGKVPSDNHFAFTQKTGFWRN
YGFGITCIYKADLLRAGGFDVSIQGWGLEDVDLFNKVIQAGLKTFRSQEIGVVHVHHPVF
CDPNLDPKQYKMCLGSKASTYGSTQQLAEIWFEKNDPNFGKSSNTNGSVRTA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcaaatacatgcatgaccactacttggacaaatacgaatggttcatgagggct
gacgacgacgtttacatcaaaggggacaaactggagaacttcctcaggagcctgaacagc
agcgagcccctgttcctgggccagaccggcctcggcaccacggaggagatggggaagctg
gcgctggagccgggggagaacttctgcatgggcggcccaggagtgatcatgagcagggag
gtgctgcggaggatggtgccgcacatcggcgagtgcctgcgggagatgtacaccacgcac
gaggacgtggaggtgggacgctgcgtgcgcaggttcgcgggggtgcagtgcgtctggtcc
tacgagatgcagcagctgttctacgagaattacgagaagaacaagaaaggctacatccgt
gacctgaggaacagcaagatccaccgagccataacgctgcaccccaacaagaaccccccg
taccagtacaggctgcacagctacatgctgagccgcaagatcgccgagctgcgccaccgc
accgtgcagctgcaccgcgagatcgtgctcatgagcaagtacagcaacaccgaaatccac
aaggaggacctgcagctgggcatgccgccctccttcatgcgcttccagccccgccaccgc
gaggagatcctggagtgggagttccttacggggaaatacctgtactcgggtgccgacggg
cagccgccccgcagagggatggactcgtcccagcgcgaggcgttggatgacatcgtgatg
caggtgatggaaatgatcaacgccaacgccaagacacgggggaggatcattgatttcaag
gagatacagtatggataccgcagggtgaaccccatgtacggagcagagtacgtgctggac
ctgctgcttctctacaagaagcacaaggggaagaagatgacggtccccgtgaggaggcac
gcgtacctgcagcagaccttcagcaagatccagttcatggagcatgaagagatggatgcc
aaagagctggccagcaaaatcaaccaggattctggctccttgtccttcctctccaactca
ctgaagatgtttgtccccttccagctcagcaggtccaaagcagaaaggaaggagctcaaa
gacaagaagatcaacatcctgatccctctctccgggcggtttgacatgtttgcgaggttc
atggggaattttgaaaagacgtgcctcattccaaaccagaacgtcaagctggttgtcctg
cttttcaactccaactccaaccctgacaaagcgaagcagattgagctgatgagagattac
cgctccaaataccccaaggctgacatgcaggttctgccggtgtcgggggagttctcaagg
gcgctggctctggaagtcggatcttctcagttccagaatgagtctttacttttcttctgt
gatgttgacttagtgtttaccacagaattcctccagcggtgtagagccaacacagttttg
ggtcagcaagtatattttcccatcatttttagccagtatgatccaaagattgtttataat
ggaaaggttcctagtgacaatcattttgccttcactcagaaaacaggtttctggaggaac
tatggctttggtatcacatgtatttacaaagctgaccttcttcgagcaggtggctttgat
gtctccatccaaggttggggccttgaagatgtagatctatttaataaagtcattcaagct
ggcttaaaaactttcagaagccaagaaattggagtagtccatgtgcatcaccctgttttt
tgtgaccctaatcttgatccaaaacaatataagatgtgcttggggtccaaagcttcaacg
tatgggtccacacaacagctggctgaaatatggtttgaaaaaaacgacccaaattttggg
aaaagcagcaatactaatggctcagtgaggacagcctaa
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