Geospiza fortis (medium ground-finch): 102044439
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Entry
102044439 CDS
T03755
Symbol
CLOCK
Name
(RefSeq) clock circadian regulator
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102044439 (CLOCK)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102044439 (CLOCK)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
102044439 (CLOCK)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102044439 (CLOCK)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
102044439 (CLOCK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
DUF6080
Motif
Other DBs
NCBI-GeneID:
102044439
NCBI-ProteinID:
XP_005415551
UniProt:
A0A6I9HB59
LinkDB
All DBs
Position
Un
AA seq
856 aa
AA seq
DB search
MFFTISTHKMSSIADRNDGSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSM
LPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDG
FFLAIMTDGNIIYVSESITPLLEHLPSDLVDQSVFNFIPEGEHSEIYKILSSHLLESDSL
TPEYLKSKNQLEFCCHMLRGTIDPKEQPTYEYVKFIGNFKCLNHVPNSAHNGFEGTIQRS
HRPSYEEKVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYL
PFEVLGTSGYDYYHVDDLDNLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYH
QWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEITADKSQDSGSDNHINTVSLKEA
LERFDTSPTPSASSRSSRKSSHTAVSDHSSTPTKMTVDTSTPPRQGLSGHEKTAQRRSSL
SSQSLSSQSLGQPVTQPAISQPATLQLQSGMTQPVFQFSAQLGAMQHLKDQLEQRTRMIE
ANIHRQQEELRKIQEQLQIVHGQGLQMFLQQSASGLNFGSVQLPSGNSSTVQQLTPINMQ
GQVVQTNQTQSGMNTGHINTPHMIQQQPLQSTATQHNQQNVLSGHNQQSSLASQSQNTVS
APLYNTMVISQPTAGNVVQVPSSLPQNNNQNAAAVTTFTQDRQIRFSQGQQLVTKLVTAP
VACGAVMVPSTMFMGQVVTAYPTFAAQQQQTQTLSITQQQQQQQQQSQQDHQQQQLTTVQ
QPAQSQLTQHPQQFLQTSRLLHGNQSAQLILSAAFPLQQSTFTQSHHQQLQSQQQQQQLS
RHRTDKMTDPSKVQPQ
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgttttttaccataagcacccataaaatgagctccattgcagacagaaatgacggaagc
atttttgatgggctggtggaagaagatgacaaagataaagctaaaagagtgtctagaaac
aagtccgaaaagaaacgtcgagatcagtttaatgtgcttatcaaagagttgggttccatg
cttccaggtaatgctcggaagatggataaatccactgtgctgcagaagagcattgacttt
ttacggaagcacaaagaaattactgcacaatcagacgccagtgaaattcgacaggactgg
aaaccaacattccttagtaatgaagagttcacacagttaatgttagaggctcttgatggt
ttttttttagcaattatgacagatggaaatataatatatgtgtctgaaagtataactccc
ttacttgaacatttgccatctgatcttgtggatcagagtgtatttaattttatcccagag
ggggaacattcagaaatttataaaatactgtcttctcatctgctggaaagtgattccttg
acaccagaatacttaaaatcaaaaaatcagctagaattctgttgccatatgctgcgagga
acaatagatccaaaagagcaacctacatatgaatatgtaaaatttataggaaatttcaag
tgtttgaatcatgttcccaactcagcgcacaatggttttgaaggaactattcagagatca
caccggccttcatatgaagagaaagtttgctttgtagccacagttagattagctacacct
caatttatcaaggaaatgtgcactgttgaagaacccaacgaagagttcacatctagacac
agcttagaatggaagttcctattcttggatcacagggcacctccaataataggttatctt
ccatttgaagttttgggaacatcaggctatgattattatcatgtggatgatctagataat
ctggcaaaatgtcatgagcatttaatgcaatatgggaaagggaagtcatgttactacaga
ttcctgacaaagggacagcaatggatttggctgcaaactcactactatatcacgtatcac
cagtggaattccaggccagagtttattgtctgtacgcacactgttgtaagttatgcagaa
gttagagcagaaagacgacgagaacttggtattgaggaatctctcccagagataacagca
gataaaagtcaggactctgggtctgacaatcacataaacacagtgagtctcaaagaagca
ttggaaaggtttgataccagccccacaccttctgcttcctccaggagttcaagaaaatct
tcacacactgcagtatcggatcattcatcaacaccaactaaaatgacagtggacactagc
actcctccaaggcaaggcttatctggtcatgaaaagactgcgcaaagaagatcatctctg
agcagtcagtctttaagctcacagtctctcggacaaccagtaacacagccagcaatatct
cagcctgcaactttacagctccagtctggaatgactcagcctgtgtttcagttttcagca
caattaggagctatgcagcatctaaaggaccagctagagcaaagaacacgcatgatagag
gcaaatattcatcggcagcaggaagagttgcgtaagatccaggagcaacttcaaattgtt
catggtcaaggactccagatgttcttgcagcagtcagcttctggactcaactttggttct
gtgcagcttccttctggaaattcttcaactgttcagcagcttacaccaataaacatgcaa
ggtcaagttgttcagactaatcagactcaaagtgggatgaacacaggccatataaatact
ccacacatgatacagcagcaacctttgcagagtactgcaacacagcataatcaacaaaat
gtacttagtggacacaatcaacagtcttctcttgccagtcagtcacagaacacagtctca
gcacctttgtacaacactatggtgatttctcagccaacagcaggaaatgtggtgcaggtt
ccctctagcttaccacagaacaacaaccagaatgctgctgcagtaaccacttttacacag
gacagacaaatcagattttctcaaggtcagcaacttgtaacaaaacttgtcacggcccca
gtagcctgtggagcagtaatggtaccaagtactatgtttatgggacaggtggtgacagct
tatcccacttttgctgcccaacagcagcagacacagactttgtcaataacacaacaacag
cagcagcagcagcagcaaagtcagcaggaccatcagcagcagcagctcaccacagtgcag
caaccagctcagtcgcagctgacccagcacccccagcagttcctacagacatccaggtta
cttcatggaaatcagtcagctcagcttattctctctgctgctttcccactacaacaaagc
actttcactcagtcccaccaccagcagctgcagtctcagcagcagcagcagcagctgtca
cgacacagaactgacaagatgactgatccttccaaagttcagccacagtag
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