KEGG   Gallus gallus (chicken): 100859816Help
Entry
100859816         CDS       T01006                                 

Gene name
SETDB1
Definition
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
gga  Gallus gallus (chicken)
Pathway
gga00310  Lysine degradation
Brite
KEGG Orthology (KO) [BR:gga00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    100859816 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gga03036]
    100859816 (SETDB1)
Enzymes [BR:gga01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     100859816 (SETDB1)
Chromosome and associated proteins [BR:gga03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     100859816 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100859816 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DUF5604 SET Tudor_4 TUDOR_5 Pre-SET MBD DUF4537
Motif
Other DBs
NCBI-GeneID: 100859816
NCBI-ProteinID: XP_015135533
CGNC: 63339
Ensembl: ENSGALG00000024051
LinkDB All DBs
Position
25
AA seq 1312 aa AA seqDB search
MRGATPASSRRIGTSSGCRKWRHAASGLTPPAPSSASIPAVGVGAGPWGRAEMDSQDIKE
LQQEVMEEMGISMEELQDIINEELEKSEYVKQKKQQLEELEKYVKQKEEEVAHVDRLFDD
AWRDFDKCEMLVKDLYSKLGLEYRESSSEEEDLAAKPTEVIEIPDDDDDDVMSIDLGWKN
SDTSPKVAKDQTLLREAMAAMRRSAQDVQKFMDAVHRRTNAQDALKDAQTPQQAPGAPQS
SGPAVGVGDLSNDGDLKVGMRILGKKRTKTWHKGTLIAIQTVGAGKKYKVKFDNKGKSLL
SGNHIAYDYHPSPDKHYVGSRVVAKYKDGDQVWLYAGIVAETPNVKNKDRFLIFFDDGYA
SYVKEWELYPVCRPLKKTWEDIEDVSCRDFIEEYISAYPNRPMVLLKNGQLIKTEWEGTW
WKSRVEEVDSSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQSGQARTRPN
VGAVRSKGPVVQYTQDLTGAGTQYKPLEQMQAASLAAQPSSPQPTEMECSDSLLAQSRKQ
VAKKSTSFRPGSGQSSPSPPVLSDAPPAGRAAAAQQHRFPGGPAQPFHGMMDRVPNEPSY
RAPLEKLFYLPHVCSYACLSRVRPMRSDQYRSKNPLLIPLLYDFRRMTARRRVNRKMGFH
VIYKTPCGLCLRSMAEIERYLFETDCDFLFLEMFCLDPYVLVDRKFQPYKPYYYIADITK
GREDVPLSCVNEIDSTPPPQVAYSKERIPGKGVFINTGWEFLVGCDCRDGCRDRSKCACH
QLTVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCNVNMCTNRLVQHGLQVR
LQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVE
NFKEGYESDAKCSSDSSGVDLKDDEEDNTGTEEQEESNEDSSDDNFCKDEGFNTSSVWRS
YATRRQTRGQKENGLSETASKDSGLTQQVGHDEAAAAASCKLPVSEETSKNKVASWLSSN
SVSDSFQDNDSTSSFKMSEGGEAKGCRADSAPGGADGEAKAPRKDEPEDPSKVPGLSDLG
RMYGYNPSPPKLEGVRRPTSKTALLQSRRHSGPLQPPAEDVLTLSSSTDSDGDNGPKAEG
QPQGTANDSDDIQTISSGSEEEEGDEKKNPSGSGPVKRQVAVKSTRGFALKSTHGIAIKS
TNMAAAEKGDSAPVCRTTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDT
HDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt
atgcgtggcgcaacgccggcctcaagtcggaggattgggacttcctctggctgccggaag
tggcgacatgcggcttccggtctgacgcccccggccccttcctcagcctccatcccggct
gtaggggtcggggctgggccgtggggccgagcagaaatggattcccaggacatcaaagag
ctgcaacaagaagtgatggaggagatgggaatctccatggaggagctgcaggacatcatc
aacgaggagctggagaagtctgagtacgtgaagcagaagaagcagcagctggaggagctg
gagaagtacgtgaaacagaaggaggaagaggtggctcacgttgaccgtctctttgatgat
gcttggagagactttgataaatgtgagatgttggtaaaggatctgtactccaagctgggc
ctcgagtaccgtgagagcagctctgaggaggaggacttggctgccaaacccacagaagtg
attgagatcccggatgacgacgacgacgacgtcatgagtatcgatttgggatggaagaac
agtgataccagtcccaaagtcgccaaggatcagactctgctgcgggaagccatggcagca
atgagaaggtctgcccaggatgttcagaaatttatggatgctgtgcacaggagaacgaac
gcccaggatgcactgaaagatgcacaaacccctcagcaagctcctggtgctccccagtct
tctggacctgctgtgggtgtgggtgatctcagcaacgatggcgatctgaaggttggcatg
aggatcctgggcaagaagagaaccaaaacgtggcacaaaggaactctgattgccatccag
acagtcggtgctggtaagaagtacaaagtgaagtttgacaataaggggaagagtttgctt
tctggcaatcacattgcttacgactaccacccctccccagacaaacactacgttgggagc
agagttgtggcaaaatacaaagatggggatcaagtttggctgtatgctggcatagtggcc
gaaaccccaaacgtgaagaacaaagacaggttcttgatcttctttgatgatggctacgct
tcgtacgtcaaggagtgggagctgtacccggtctgcaggccgcttaagaagacgtgggag
gacatagaggacgtgtcgtgccgggacttcattgaggagtacatcagtgcataccccaac
cgtcccatggtgctgctgaagaatggccagctgatcaaaaccgagtgggaggggacctgg
tggaaatccagggtggaagaagtggacagcagtctggtcaaaatcctcttcctggatgac
aaacgctgtgagtggatttaccggggatccacgcgcctcgagcccatgttcagcatgaaa
acctccactgcctctacccaggaaaagaagcagagtgggcaggcgaggactcggcccaac
gtcggcgccgtgcggagcaaaggccccgtggtccagtacacacaggatctgaccggagct
ggaacgcagtacaaacccctggagcagatgcaggcggcctccctggcagcacagccctct
tctccgcagcccaccgagatggagtgctctgacagtctgctggcccagtcgaggaagcag
gtggccaagaagagcacatccttccgtcccggctcggggcagtcgtcgccttcaccgcct
gtgctgagcgatgcacctccggcaggaagggcagctgcagcccagcagcatcgcttcccc
ggcgggccggcgcagcccttccacggcatgatggaccgcgtgcccaacgagccgtcgtac
cgcgcgccgctggagaagctcttctacctcccccacgtctgcagctacgcctgcctgtcc
cgcgtgcggcccatgcgcagcgaccagtaccgcagcaagaaccctctgctcatccctctg
ctctacgacttcaggaggatgacggcccgccggagggtgaaccgcaagatgggcttccac
gtcatctacaagacgccgtgcgggctctgcctgcgcagcatggccgagatcgagcgctac
ctcttcgagaccgactgcgacttcctcttcctggagatgttctgcctggatccctatgtc
ctggtggaccgcaagttccagccctacaaaccctactattacatcgccgacatcaccaag
ggccgcgaggacgtgccgctgtcctgcgtcaacgagatcgacagcacgccgccgccgcag
gtggcctacagcaaggagcgcatccccggcaagggggtcttcatcaacaccgggtgggag
ttcctcgtgggctgcgactgcagggacggctgcagggacaggtcgaagtgtgcctgtcac
cagctgacggtccaagcgaccggctgcaccccgggagggcagatcaaccccaactcgggg
taccagcacaagaggctggaggagtgcctcccaactggggtttatgagtgcaacaagagg
tgcaaatgcaacgtcaacatgtgcaccaaccgcctggtccagcacgggctgcaggtccgg
ctgcagctgttcaagactcagaataagggctggggcatccgctgcctcgatgacatcgcc
aagggctccttcgtctgcatctacgcagggaaaatcctcacggatgactttgccgacaag
gaaggcctggagatgggggacgaatactttgcaaacctggaccacatcgagagcgtggag
aacttcaaggagggctacgagagcgacgccaagtgctcatctgacagcagcggggtggac
ctgaaggacgacgaggaggacaacacgggcacggaggagcaggaggagtccaacgaggac
agctccgacgacaacttctgcaaggatgagggcttcaacaccagctcggtgtggcgcagc
tacgccacgcggcgccaaacccgcggccagaaggagaacgggctctcagagacggcctcc
aaggactcggggctcacccagcaggtcggccacgatgaggccgcggccgccgcctcctgc
aagctgcccgtgagcgaggagacctccaagaacaaagtggcctcgtggctcagctccaac
agcgtgtctgacagcttccaggacaacgacagcacctcgtccttcaagatgagcgaagga
ggggaggccaaaggctgcagggccgattctgccccggggggagcggacggagaggcgaag
gcgccgaggaaggatgagcctgaagatccgagcaaggttcccgggctgagcgacctgggc
aggatgtatggctacaaccccagcccccccaaactggaaggggtgcgcagacccaccagc
aaaacagcgctgctgcagagcaggcgccactcgggccccctgcagccccccgccgaggac
gtgctgaccctgtccagcagcaccgacagcgatggggacaacgggcccaaggcagagggg
cagccccagggcactgccaacgacagcgacgacatccagaccatctcatcgggctccgag
gaggaggaaggggacgagaagaagaacccctctggttcagggcccgtgaagaggcaggtg
gcggtgaaatccacgcgggggtttgccctgaagtccacccacggcatcgccatcaaatcc
accaacatggcagcagccgagaagggcgacagcgctcccgtgtgcaggaccacgcggcag
ttctacgacggggaggagtcctgctatatcatcgacgccaaactggaggggaacctgggc
cgctacctcaaccacagctgcagccccaacctcttcgtgcagaacgtctttgtggacaca
cacgacctccgcttcccatgggtcgccttctttgccagcaagaggatccgagcggggacg
gagctgacgtgggattacaactacgaggtgggcagcgtggagggcaaagagctgctgtgc
tgctgcggggccatcgagtgcagagggcggctgctgtga

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