Gallus gallus (chicken): 101747522
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Entry
101747522 CDS
T01006
Name
(RefSeq) collagen alpha-1(XVIII) chain-like isoform X1
Organism
gga
Gallus gallus (chicken)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
101747522
NCBI-ProteinID:
XP_015155144
CGNC:
67021
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Position
27:complement(7254052..7261741)
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AA seq
845 aa
AA seq
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MSRTPLSSAPRGCSMRLGGTPRLLRALCILSVLAGLLPHGTAQWFYPLGSEDTTPEPGTS
PATPTLPTPDGEEGAADTEPMKKLPLSKPPLGTASRRREPSARTKGQGHAPLRTQAQHNH
PTASPQIFEGSADEEEFLQIKTTPKGLPQRVPTAPRPDVALQMHNGSNCICPARPGPPGP
KGEKGDRGFPGERGQPGLSGERGRTGSPGPPGHQGPRGPPGPPGPPGPPGSPGAGGARSP
PAPAALPKESERELGAASPTGKPGPPGAPGLPGPPGPPGPPGYPGHEGSPGLPGREGKPG
PPGPPGAVGPPGFPGSEGAPGSPGLAGSDGPPGAPGLPGTQGPPGAPGHEGPPGPPGPVS
FPGKPGLRGEPGFPGSKGEKGEQGLPGMPGSPGRTGEMGAPGMPGPMGPPGPPGDNRCEM
RHAGHHGAAGPPGPKGEKGDPGERGCCYGEPGCKPGHLPFPSPGSQPSAWYQQHSKEEPD
IYGAIIPHGPRGPPGPPGPPGPPGAPGLLYFNRVYPTRGQQPCKQPAAASAGWAVASPDA
DVPHSEPLEPSADFRRQTWVFRSKELMLKSSSAVPEGSLVYVREGNNAFVRTPRGWSRLL
LEDSESLFAGDDPSASTPQYQEAKQAQTRGPNTEPSSGARTDSPVSPLLQVLEEDGAGLP
STLPTTAAPRMPSLRLAALNAPLSGDMSGIRGADLQCYRQSQEARLYGTFRAFLSAPSQD
LASIVKRTDRTLPIVNLKGQLLARSWSALLQSQAGAAPRSPIYAFNGRNVLTDALWPRGM
AWHGSTPRGGHAKRRDCQGWRSSGPGEGLAAPLAQGRLLAGQRRNCSEALVLLCVEVAFP
YRHMW
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgagccggacccccctgtcctcagcaccccggggctgcagcatgaggctggggggtacc
ccacgcctcctccgtgcgctctgcatcctctcagtgctggccgggcttctgccccatggc
acggcccagtggttctacccactgggctctgaagacaccactccagagcccggcaccagc
cccgcaacccccacgctgcccaccccggatggggaggaaggtgctgctgacacggagccc
atgaagaagctgccgctgagcaaacccccgttgggaacggcctcgaggagacgggagccc
tctgccaggaccaagggccagggccatgccccgctgcgcacacaagcccagcacaaccac
cccacggcctccccgcagatcttcgagggcagcgcagacgaagaggagttcttgcagatc
aagaccacgccaaaggggctgccccagcgtgtgcccacggcccccaggccggatgtggcc
ctgcagatgcacaatggctccaactgcatctgccctgcacgtcccggccctcctggcccc
aagggagagaaaggtgaccgcgggttccccggggagcggggccagccggggctgtctggg
gagagagggaggacgggcagcccggggccaccgggtcaccaggggcctcggggccccccc
ggaccaccaggacctccagggccaccaggatcaccgggtgctgggggagccaggagtcca
cccgcacctgcagcactccccaaggaatcagagagagagctgggagcagccagccccacc
gggaagccaggaccccccggcgccccagggctgcctggcccccctggcccccctggcccc
ccaggttacccaggccatgaaggctctccagggctccctgggagggaggggaagcctggg
ccccccggcccaccaggggccgtgggaccacctgggttcccagggagtgaaggagctccg
ggatccccaggcttggctgggtctgatggccccccgggagcaccgggactcccaggcaca
cagggaccccccggggcacccgggcacgaagggccccctggccccccaggacctgtgtca
ttccctggcaaaccagggctccgaggggagccgggattcccaggatcaaagggtgagaag
ggtgagcaagggctgccgggcatgccggggagccctggccgcaccggggagatgggagcc
ccagggatgcccggtcctatgggaccaccagggccaccgggggacaacaggtgtgaaatg
cgccatgctgggcaccatggagcggccggcccaccaggtcccaagggtgaaaagggcgat
ccaggagagcgggggtgctgctatggggagccgggctgcaaaccgggccacctcccgttc
cccagccctggcagtcagcccagcgcctggtaccaacagcacagcaaggaggagccggat
atctacggagcaatcattccccacggtccccgaggtccccccggcccccctggtccccct
ggtccccccggagcaccaggactcctctacttcaatcgggtgtaccccacgcgaggacag
cagccctgcaagcagccggcagcggccagcgcaggctgggcagtggcttctccagatgct
gatgttccccactcggagccgctggagcccagcgctgacttccggcgccagacgtgggtg
ttcaggtcgaaggagctgatgctgaagtccagcagcgccgtccccgagggcagcctggtc
tacgtgcgggaggggaacaacgccttcgtgcgcaccccccggggctggagcaggctgctg
ctggaggactcagagtcgctctttgcgggtgatgacccctccgcctccacgccgcagtac
caggaggcaaagcaggcacagacacgaggtcccaacacagagccatcctcgggggcccgg
acagactcaccggtgtccccgctattgcaggtcctggaggaggacggagctgggctgccc
agcaccctgccgaccaccgccgcccccaggatgccctctctccgtctggcggcccttaac
gcgcccctctccggggatatgagcggcatccgcggcgccgacctgcagtgctaccggcag
tcgcaggaggcccggctctacggcactttccgggcgttcctgtcggcccccagccaggac
ctggcctccatcgtcaagaggacggacaggaccctccccatcgtcaacctgaagggccag
ctgctggctcgctcctggagcgccctcctgcagagccaggcgggagcggccccccggagc
cccatctacgccttcaatgggcgcaacgtgctgacggacgccctctggccccgcgggatg
gcctggcacggatccacgccgcggggcggccacgccaagcgccgggactgccagggctgg
cggagctccggccccggggagggcctggcggccccgctggctcagggccggctgctggcc
gggcagcgccgcaactgctccgaggcgctcgtgctgctctgcgtggaggtcgccttcccg
taccgccacatgtggtga
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