Gallus gallus (chicken): 395293 Help Entry 395293            CDS       T01006                                  Symbol SLIT1 Name (RefSeq) slit homolog 1 protein precursor   KO K06838   slit 1 Organism gga  Gallus gallus (chicken) Brite KEGG Orthology (KO) [BR:gga00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:gga00536]     395293 (SLIT1) Glycosaminoglycan binding proteins [BR:gga00536]  Heparan sulfate / Heparin   Axon guidance molecules    395293 (SLIT1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_8 LRR_4 LRR_5 EGF Laminin_G_2 Laminin_G_1 LRRNT hEGF LRRCT LRR_1 LRR_9 EGF_CA LRRCT_2 Laminin_G_3 Motif Other DBs NCBI-GeneID:  395293 NCBI-ProteinID:  NP_001264265 CGNC:  49247 Ensembl:  ENSGALG00000042871 UniProt:  D2XV92 LinkDB All DBs Position 6:23344960..23376231 Genome browser AA seq 1544 aa AA seqDB search MAVPPGAASTSGGAAGVPAALRAAAWLLAFVALCRGRAAACPPLCACSGTTVDCHGTALR AVPKSIPRGTERLELNGNNITRIHKNDFSGLKQLRVLQLMENQISVVERGAFDDMKELER LRLNRNQLHTLPELLFQHNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIE DGAFRALRGLEVLTLNNNNITSIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLAQWLRQR PTIGLFTQCAAPAQLRGLNVAEIQKNEFSCSGQADGVHAQLCSLSSGSCPAMCTCSNGIV DCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAF QGLRSLNSLVLYGNKITDLPKGVFGGLFALQLLLLNANKINCVRADAFQDLQNLSLLSLY DNKIQSLAKGTFTSLRAIQTLHLAQNPFVCDCNLKWLADFLRANPIETSGARCASPRRLA NKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPPKCRCEAGVVECSNLKLTK IPERIPQSTAELRLNNNEISILEATGVFKKLPHLKKINLSNNKVSEIEDGAFEGAASVSE LHLTVNQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQISTIA PGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQHPDFLRQIPLQDVA FPDFRCEEGQEETSCIPRPQCPQECTCLDTVVRCSNKHLKALPRGIPKNVTELYLDGNQF TQVPGQLSTFKYLQLVDLSNNRISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFEGLRS LRLLSLHGNDISTLPEGIFADVTSLSHLAIGANPLYCSCNLRWLSSWVKTGYKEPGIARC AGPPDMEGKLLLTTPAKKFECQGPPSLIVQAKCNPCLSSPCRNQGTCHNDPLGSYRCACP IGYKGRDCEVALDGCSQNPCANGGTCQPQDGDRDGFRCLCAAGFEGPSCRTASDPCKEHS CENGGSCVAGATNYTCLCPAHYTGDFCEQPPDFCSAELSPCQHGSTCIPTSQGPRCECAP GYVGTNCSKDFDDCQDHRCQNNARCVDEVNGYSCLCAEGYSGQLCEMPPHAAGQPGLCER AECQNGAACVERGSRALCQCLPGFGGPKCEKLLSVNFVDRDTYLQFTDLQDWPRANITLQ VSTAEDNGILLYNGDSDHMAVELYQGHVRVSYDPGTHPSSAIYSAETINDGQFHTVELVT FDQMVNLSIDGGSPMTMDNSGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQLLNGTSFHGC IRNLYINNELQDFTKTRMTPGVVPGCEPCRKLYCLHGICQPTGAQGPVCHCEPGWDGPHC DQPRGGPCQGHKCVHGLCLPLDALSYSCQCHQGYQGALCNQPSTPPDPCRLLSCHHGRCR LTPGGQPVCECHSGYSGTLCDQEPECHGEPVRDYHQVQRGYAICQTTRPVPYVQCRGTCG GDTDTGCCIGLRPRRRKYAFECSNGATFVEEVEKPSKCGCSPCL NT seq 4635 nt NT seq  +upstreamnt  +downstreamnt atggcggtgccgcccggcgcggcctcgacctccggaggggcagcgggggtcccggcggct ctgcgggccgccgcctggctcctggcgttcgtcgcgctgtgccggggccgcgccgcagcc tgcccgccgctctgcgcctgcagcggcaccacggtggattgccacggtacggccctgcga gccgtgcccaagagcatcccccgcggcaccgagcgcctggagctcaatggcaacaacatc acacgtatccacaagaatgacttctctggactgaagcagctccgtgtcctgcagctgatg gaaaaccagatcagtgtggtggagcgtggtgcatttgatgacatgaaggagctggagcgg ctacggctgaaccgcaaccagctgcacaccctgcccgagctcctcttccagcacaaccag gctctgtccaggctggacctgagcgagaacttcatccaggccatccccaggaaggctttc cgtggggccacagacctcaagaacttgcaactggacaagaaccagatcagctgcattgag gatggggcttttcgggctctgcgggggctggaagtcctgacgctgaacaacaacaacatc acgtccatccccgtctccagcttcaaccacatgcccaagctgcgaacgttccgcctgcac tccaaccacctgttctgcgactgccacctggcctggctggcacagtggctccgccagcgg cccaccatcgggctcttcacacagtgtgcagccccggcacagctccgcggcctcaatgtg gctgagatccagaagaatgagttcagctgctctggacaagcagatggagtgcatgcacag ctctgcagcttgtcctctggctcctgcccggccatgtgcacctgcagcaatggcatcgtg gactgtcggggcaaggggctgacagccatccccgccaacctgcccgagaccatgacggag atacgcctggagctcaatggcatcaagtccatccccccgggtgccttctccccctacaag aagcttcgtcggatagatctgagcaacaaccagatctcggagatcgcccccgacgccttc cagggtctgcgctctctcaactcgctggtgctgtatggcaacaagatcaccgacctcccc aagggcgtcttcgggggactttttgccctgcagttgctgctcctcaatgccaacaagatc aactgcgtgcgtgcggatgccttccaggacctgcagaacctctcgctgctctcgctctat gacaacaagatccagagcctggccaagggcaccttcacctcactgcgtgccatccagacc ctgcacctggcccagaacccctttgtctgtgactgcaacctgaagtggttggcggatttc cttcgtgccaaccccattgagaccagcggtgcccgctgtgccagcccccggcgcctggcc aacaagcgcattgggcagatcaagagcaagaagttccgctgctcagccaaagagcagtat ttcatcccagggacagaggattaccagctgaacagtgagtgcaacagcgacgtggtgtgc cccccgaagtgccgctgcgaggccggtgtggtggagtgctccaacctgaagctcacgaag atcccagagcgcatcccacagtccacagccgagctgcgcctgaacaacaatgaaatctcc atcctggaggccacgggcgtcttcaagaagctgcctcacctgaagaaaatcaacctcagc aacaacaaggtgtcggagatcgaggacggggcattcgagggggctgcatccgtcagtgaa ctgcacctcaccgtcaaccagctggagtcagtgcggagcggcatgttccgggggctggac gggctgaggacattgatgctgaggaacaaccgcatcagctgcatccacaacgacagcttc acggggctgcgcaacgtgcgcctgctctcactgtacgacaaccagatcagcaccatcgca ccgggtgccttcgacacgctgcagtccctctccacactgaacctgctggccaaccccttc aactgcaactgccagctggcctggctgggggactggctgcgcaagaggaagatcgtgacg gggaacccgcggtgccaacaccccgacttcctccggcagatcccgctgcaggacgtggcc ttccctgacttcaggtgtgaggaaggtcaggaggagacgagttgcatcccacggcctcag tgccctcaggagtgcacctgccttgacaccgtggtgcgctgcagcaacaagcacctcaag gccctgcccaggggtatccccaagaatgtcaccgagctctacctggatggaaaccagttc acccaggtgccgggtcagctctccaccttcaagtacctgcagctggtcgatctgagcaac aacaggatcagctcactgagcaactcctccttcaccaacatgagccagctcaccaccctg atcctcagctacaactccctgcagtgcatccctccactggccttcgagggcctccgctcc ctgcggctgctgtctctccatggcaacgatatctccaccctccctgagggcatcttcgcg gatgtcacctccctgtcccacctagccatcggggccaacccactgtactgcagctgcaac ctgcgctggctctccagctgggtgaagacaggctacaaggagccaggcattgcccgctgc gccgggccccccgacatggagggcaaactgctgctcaccacccctgccaagaagtttgag tgccaagggcccccatccctgatcgtgcaggccaagtgcaacccctgcctctccagcccc tgccgcaaccagggcacctgccacaacgacccgctcggctcctaccgctgcgcctgcccc atcggctacaagggcagggactgtgaggtggcgttggatggctgctcccaaaacccctgt gccaatgggggcacctgccagccccaggatggggacagggacggtttcaggtgcctgtgt gcagcaggctttgagggtccgagctgccgcaccgccagtgacccctgcaaggagcacagc tgtgagaatgggggctcctgcgtggctggtgccaccaactacacctgcctgtgccctgct cactacacaggggatttctgtgagcagccaccagatttctgctcggccgagctcagcccg tgccagcatggctccacgtgcatccccaccagccaggggcccaggtgtgagtgcgcaccc ggctacgtgggaaccaactgcagcaaggacttcgacgactgccaggaccaccggtgccag aacaacgctcgctgcgtggatgaggtgaatggctactcctgcctctgcgccgagggctac agtggacaactgtgcgagatgccaccccatgccgccgggcagcccgggctctgcgagcgc gctgagtgccagaatggggccgcctgtgtggagcggggctcccgtgccctctgccagtgc ctgcctggctttggcggccccaagtgtgagaagctgctgagcgtcaactttgtggaccgc gacacgtacctgcagttcaccgacctgcaggactggccccgggccaacatcaccctgcag gtctccacggctgaggacaacggcatcctgctgtacaacggtgacagcgatcacatggct gtggagctgtaccagggccatgtcagggtcagctatgaccccggcacccaccccagctca gccatatacagtgccgagaccatcaacgacgggcagttccacactgtggagctggtgacc ttcgaccaaatggtgaacctctccatcgatggtggcagccccatgaccatggacaactcg ggcaagcactacacgctgaacagcgaggccccactctatgtcggggggatgcctgtggat gtcaactcagccgccttccgcctctggcagctcctcaatggcaccagcttccacgggtgc atccgcaacctctacatcaacaatgagctgcaggacttcaccaagacacggatgacaccc ggcgtggtgccgggctgtgagccctgccgcaaactgtactgcctgcacggcatctgccag cccaccggcgcccagggacccgtctgccattgcgagcctggctgggatgggccccactgt gaccaaccccgtggtggcccctgccaggggcacaagtgcgtgcacgggctctgcctgccc ctcgacgccctctcctacagctgccagtgccaccagggctaccagggtgccctgtgcaac cagcccagcacaccgcctgacccctgccgcctcctgtcctgccaccacggccgctgccgc ctcaccccaggcggccagcccgtatgtgagtgccacagcggctacagcgggaccctctgt gaccaagagcccgagtgccacggagagccggtacgggactaccaccaggtgcagcggggc tacgccatctgccagaccacgcggccggtgccctacgtgcagtgccggggcacgtgcggc ggtgacaccgacaccggctgctgcatcgggctgcggccgcggcgcaggaaatatgccttc gagtgcagcaacggcgcgaccttcgtggaggaggtggagaagcccagcaagtgcggctgc agcccgtgcctctga

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