Gallus gallus (chicken): 417166
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Entry
417166 CDS
T01006
Symbol
TSC1
Name
(RefSeq) hamartin isoform X2
KO
K07206
tuberous sclerosis 1
Organism
gga
Gallus gallus (chicken)
Pathway
gga04140
Autophagy - animal
gga04150
mTOR signaling pathway
gga04218
Cellular senescence
gga04910
Insulin signaling pathway
gga05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
417166 (TSC1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
417166 (TSC1)
09143 Cell growth and death
04218 Cellular senescence
417166 (TSC1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
417166 (TSC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
417166 (TSC1)
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
Motif
Other DBs
NCBI-GeneID:
417166
NCBI-ProteinID:
XP_004945979
CGNC:
2554
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Position
17:complement(7022279..7049525)
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AA seq
1155 aa
AA seq
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MAQQGNVGELLSMLDSPILGVLEDITAAFKDNLICDRGPMLVNSLVDYYLETNSQQALHI
LSTLQEPHDKHLLDKINEYMGKAATRLPTLSLLGHVIRRQPSWKHKLSQAPLLLSLLKCL
KTDTDVVVLTTGVLVLITMLPMIPQSGKQYLHDFFGIFGRLSAWCLQNPGHVAEIYLVHL
HASVYALFHRLYGMYPCNFVSFLRSHYSMKENLETFEEVVKPMMEHVRIHPELVTGSKDH
ELDPRRWKRLETHDVVIECAKISLDPAEASYEDGYYSASRKSCTNLKHHQTDPSASHYID
TQSSYGTSTPYSTPRLTLSQLPGQLPQILSPQSIKLSTEPQQVTIWSPSAVCGMTTPPTS
PGIVPSESSQSTSQPYSKAFGTSAVGKGTPLGTPATSPPPCTSDDFVHVSLPSAAATPPK
KEDKPDSGRPSLYRQQNVISSDKSLDTSGSKSSVTLSDLPEFLGGLSFEDSAEKDREEDA
ISKEISEITTDAEHMVPRGGFDSPFYHTNENLSGSQKKTQSVVSSVQGHSLTSEPLTSSL
DKPGPESALETPKQTFTPIDKPCGGSGESPAGNREGTSGETSILTPSPCKASAQGRAVFG
SGQPPLYEHLFEVALPKTAYLFVGKKTEELLKKAKGTQDKDCMSSTSPVEVLDRLIQQGA
DAHTKELNKLSLPSKSADWTHFGGSPPSDEIHTLRNQLLLLHNQLLYERFKRQQHALRNR
RLLRKVIKATALEEHNAAMKDQLKLQEKEIQALKLSLQKEQARYHQFQEEHEGIVAQLHS
QIRQLQHDREEFYNQSQELQTKLEDCRNMIADLRLELKKANNKVCHTELLLSQVSQKLSN
SESVQQQMEFLNRQLLVLGEVNELYLEQLQHKHTDTTKVEMLHAAFRKELEKAKLCVQQQ
SQRLDASQKRIAELESQLSKKDHLFLEQKKYLEDVKIKARGQLQAVESRYRAQKRITQAF
ELEILNLFGRLENSPLKKLEDEKTEAAEAAEERLDCGNEGCADTVAGYSEETIDRNGETK
PPSTRGSSKGGSNSELSTPEKKQNQRFSSHWETSMLREPSTTVPLTVGSLPSSKSFLGMK
SRELFRNKSESQCDEHGVTINSLSDTLKTELCKDPSMETKAPPSPDNLSLSPKIQESSVG
QLHIMDYNETHHDHS
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcaggggaatgttggtgagctcctctcaatgctggattctccaattctgggt
gtcctggaagacataacagctgcattcaaagataatctcatttgtgaccgtggacctatg
cttgtgaacagcctggtagactattacttggaaaccaattctcagcaggcactgcatata
ctgtccacattgcaggagcctcatgacaagcaccttctggacaaaattaatgaatatatg
ggcaaagctgctactcgtttacccactctctcgctgctgggacatgtgataaggcgacaa
ccatcgtggaaacataagctttctcaagcacctctcctactttcattacttaaatgtctc
aagactgacacagatgtagtagtactcaccacaggtgtcctagtgctaataaccatgttg
ccaatgattcctcagtctggcaaacagtacctccatgatttctttggtatctttgggcgt
ctctcagcctggtgcttgcagaatccaggtcacgtggcagagatttaccttgtccatctt
catgccagtgtttatgctctctttcatcggctttatggaatgtatccttgcaattttgtc
tcctttctgcgttctcactacagtatgaaggaaaacttggagacctttgaagaggtagtc
aagccaatgatggaacatgtgcgaattcatccagaattagtgactggatctaaggaccat
gaactggacccacgaaggtggaaaagactagaaactcatgatgttgtgatagaatgtgcc
aaaatctccctggaccctgcagaagcctcatatgaagatggctattactctgcgtctcgg
aaatcctgtacaaacttaaaacatcatcaaactgaccccagtgccagccattacattgac
acacagagcagctatgggacgtctaccccatattccactcctcggctaacactatcacaa
ctgccagggcagctacctcagattctgagcccgcagtcaataaagctgtcaactgagcca
cagcaggttaccatctggagtccttctgcagtttgtggtatgaccactccaccaacctcc
cctggaattgtcccatcagagtcatcccagtcaacatcacaaccttacagcaaagctttt
ggcacatctgcagtggggaagggaacacctttggggacaccagccacatctcctccaccc
tgcacttcagatgactttgtgcatgtctcacttccttcagctgctgccacacctcctaaa
aaggaggacaaaccagattctgggaggccttcactgtaccgacagcaaaatgtcataagc
agcgataaatcattggacacatctggtagtaaaagttcagtaaccttaagtgatcttccg
gagtttttaggcggtttgtcttttgaagatagtgctgaaaaggacagagaagaagatgca
atatctaaagagatctctgagatcacgactgatgctgaacacatggtgcctagaggagga
tttgactctccattttatcacacaaatgaaaatctgtcaggttctcagaagaagacccag
tcagtagtctctagtgtgcagggacacagtctgacctctgagcctttaacgtcttctctg
gacaagcctgggcctgagagtgcactggagacacccaaacaaacatttactcccatagac
aagccctgcggaggctctggtgaaagccctgctggtaacagggaaggaacctctggggag
acaagtattctcactcccagcccttgcaaagcatcagcacaaggaagagcagtgtttggg
agtgggcagcctcccctgtatgagcacctttttgaggttgcgctaccaaagactgcctac
ctctttgttggcaagaagactgaggagctgctaaagaaagccaagggaacccaggataaa
gactgcatgtcctctacttctcctgtggaagtactggacagactgatacagcaaggggca
gatgcacacactaaggaactgaacaaattgtctctgccaagcaaatctgctgactggact
cactttggaggttctcccccttcagatgagattcacaccctgcgtaaccaattgctgttg
ctgcacaaccagttgctgtatgaacgcttcaaaagacagcagcatgcccttcggaaccgg
cggctcttgcggaaagtgattaaagccacagcactggaggaacataatgctgccatgaaa
gatcagctgaaattacaggaaaaagaaatccaggccttgaaactgagtctgcagaaagaa
caggccaggtaccaccagtttcaggaggagcacgaagggatagtggctcagcttcacagc
cagatcagacagctgcaacatgaccgtgaggaattctacaaccagagccaggaattgcag
accaagctggaagactgcaggaacatgattgcagatctgaggttagaattgaaaaaggct
aacaacaaagtctgtcacacagaactgcttcttagccaagtttctcaaaagctttccaac
agtgaatcagtgcaacagcagatggagttcttgaacagacaacttctggttcttggagag
gtcaatgagttgtacctggagcagctgcagcacaagcacacagacactacaaaggttgaa
atgttgcatgctgcttttcgaaaggaactggagaaagcaaaattgtgtgttcagcagcaa
agccaaaggctcgatgcttctcagaaacggatagctgaactggaatctcagctttctaaa
aaggaccacctcttcttggagcaaaagaaatacctggaagatgtcaaaatcaaagcaaga
ggtcagttgcaagcagtagagagtagatacagggcccagaaaaggatcacccaggcgttt
gagctggagatcttgaacctgtttggccgactggagaacagcccgctgaaaaaacttgaa
gatgaaaaaacagaagcagctgaagcagcagaagaaaggctggattgtggtaatgaaggt
tgtgcagatactgtggcaggatacagcgaagaaaccattgatagaaatggagaaaccaaa
cctcccagcactcgaggtagcagtaaaggtggcagcaacagtgagctctccaccccagaa
aaaaaacagaaccagagattcagcagtcactgggagacctccatgttgcgggagccctcc
actactgtcccactgactgtaggttcactccccagctccaagagcttccttggtatgaag
tcacgagagttgtttcgcaacaaaagtgagagccagtgtgatgagcatggtgtaaccatc
aacagcctttctgatactctaaagactgaactatgtaaagatccaagcatggagacgaag
gctcctccaagccccgataaccttagcctctcacctaagatccaggaaagcagtgttgga
cagcttcatatcatggactacaatgaaactcatcatgaccacagttaa
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integrated database retrieval system