Gallus gallus (chicken): 422754
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Entry
422754 CDS
T01006
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
gga
Gallus gallus (chicken)
Pathway
gga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
422754 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
422754 (FIP1L1)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
422754 (FIP1L1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
422754
NCBI-ProteinID:
XP_015141019
CGNC:
10426
Ensembl:
ENSGALG00000013943
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Position
4:complement(65720757..65758384)
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AA seq
529 aa
AA seq
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MSTGEVERLSTDLGGAAGDEEEEWLYGDENEAERPEEEKTSAPPPPGNEEEAAENGVVKT
KVTEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQFSYGAAPVNLNIKTGGRVYGSSAGVKV
KGVDLDAPGNINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIR
MGLEILPVTSATNKITVQQGRTGNLEKELAVQSTKADFTSPPALFKSGIPTNRRLSGAID
VIGQTITISRVEGRRRANENSNIQVLSERSNPEVDNFTKPPPFFPPGAPPTHLPPPPFLP
PPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLIPTIESGHSSGYDSRSVRAFSYG
SVTFPHLAGSAPSWSSLMDSSKQWDYYARREKDRERDRDRSRDRDRDRDRDRDRERTRDR
ERDRDHSPSSSAFNSDEERYRYRDYAERGYDRHRTSREKDDRHRERRHREKEDTRHKSSR
SNSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASSEPAPEQENTEAAPAE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggcgaggtggagcggctgtccacggacctcggcggggccgccggggacgag
gaggaggagtggctctacggcgatgaaaatgaagcagagagaccagaagaagaaaaaact
agtgctccacccccacctggaaatgaagaggaggctgcagaaaatggcgttgtgaaaacg
aaggtgactgaggctgaggatgacagtgatagtgatagcgatgatgatgaagatgatgtt
caagtcaccataggagatattaaaacaggagctccacagtttagttatggagcagcacct
gtgaacctcaatattaagacaggaggacgagtttatggatcttctgcaggtgtaaaggtg
aaaggggtggatttagatgcaccaggaaatattaatggtgtaccacttctggaagtagat
ctagattcttttgaagataaaccttggagaaaaccaggggctgatttatctgattatttc
aactatgggttcaatgaagatacctggaaagcatactgtgaaaaacagaagagaatacga
atgggtcttgaaattttaccagttacctcagccacaaataaaattacggtacaacagggc
agaactggaaatctggagaaagagctggcagtgcagtcgaccaaagctgatttcacatct
cctcctgccttattcaaatcaggaattccaacaaacaggcgattatctggtgcaatagat
gtgattggacagaccatcactatcagcagggtagaaggacgacgacgtgctaatgaaaac
agcaacatacaggttctttcagaacgatctaatcctgaagtagacaattttaccaagcca
cctccatttttccctccaggagctccacctactcaccttccaccacctcctttcctccca
ccccctccaactgtcagtactgctccgcctctgattcctcctccaggtataccaataaca
gtaccaccaccaggctttccaccaccacctggcggtcctccaccttccctcatacccacc
atagaaagtggacattcctctggctatgacagtcgttctgttcgtgcattttcatatggc
agtgtcacctttccgcaccttgcaggttctgctccttcatggtctagtcttatggacagc
agcaaacagtgggattactatgcacggcgagagaaggatagggagcgggacagagatcga
tctcgggatcgagatcgcgaccgggaccgagacagagatcgagaacgtaccagagacagg
gaaagggaccgagatcacagcccgtcttcgagcgcgttcaacagtgatgaagaacgatac
agatacagagactatgcagaaagaggctatgaccgccataggacaagcagagagaaagat
gaccgacacagagagaggagacacagagagaaagaagatacaagacacaaatcatctcga
agtaacagcagacgccgccacgacagtgaagaaggggacagccacagaaggcacaaacac
aaaaaatccaaacgaagcaaagaaggaaaagaagccagcagtgaaccagctcctgagcag
gaaaacactgaagctgcccccgcggaatag
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