Gallus gallus (chicken): 425999
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Entry
425999 CDS
T01006
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
425999 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gga03000
]
425999 (KDM2A)
04121 Ubiquitin system [BR:
gga04121
]
425999 (KDM2A)
03036 Chromosome and associated proteins [BR:
gga03036
]
425999 (KDM2A)
Enzymes [BR:
gga01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
425999 (KDM2A)
Transcription factors [BR:
gga03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
425999 (KDM2A)
Ubiquitin system [BR:
gga04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
425999 (KDM2A)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
425999 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
425999 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
425999
NCBI-ProteinID:
XP_015128110
CGNC:
10022
UniProt:
A0A3Q2U6R1
LinkDB
All DBs
Position
5:127815..161890
Genome browser
AA seq
1205 aa
AA seq
DB search
MAAAAPVRGQRRRRDLEEEDDDSSPGVSFSLSSEESEMEPEEERIRYSQRLRGTMRRRYE
DDGISDDEIEGKRTFDLEEKLSTNKFNSTFVIFMEGKDFTVEYIQRGGLRDPLIFRSSDG
LGIKMPDPDFSVNDVRLCVGSRRMVDVMDVNTQRDIEMSMAQWARYYETPEAEREKLYNV
ISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMS
VKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
ECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLSMDMELSSSDSVNMEEEEEEEEDA
AGKEPRRPITRRSVLTSPVANGANVDYDELSRSCRSSLPALKKSPSIDSSDSSRGSQNGQ
AWEPHGGSPRKSRRVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKLLL
EEYANSDPKLALTGIPIVQWPKRDKLKLQARLRVRLPTIPITKPHTMKPTPRPTPIRPTM
SPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHS
VTCALCGEVDQNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPNCWECPKCYQ
GDDTEKGQKRKVEESDDDMAQAKVLRPLRSCEEPLTPPPNSPTPMLQLIHDPVSPRGVVT
RSSPGAGPSEHHSASRDERFKRRQLLRLQATERTIVREKENNPSGKKELSEVEKAKLHGS
YLTVTLQRPTKDVHGTSIVPKLQAITASSANLQHSPRVVMRHTPARMHPRGGGEDEVAAE
EDEEDEDEDDENMEEGGAARLNGRGGRVQEGEESWMQREVWMSVFRYLTRRELCECMRVC
KTWYKWCCDKRLWTKIDLSRCKSITPQALSGIIKRQPISLDLSWTNISKKQLTWLVNRLP
GLKDLILAGCSWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPSQDNRSK
LRNMIDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSANLLTAVGSSTRNSLT
ELNMAGCNKLTDQALLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDEKL
IQKIS
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctcctgtgagaggacaaaggcgcaggagggacctggaggaagaggac
gacgacagcagccctggagtgtccttctcgctttcttcagaagagtcggagatggagccc
gaggaagaaaggatccgttacagccaaagattacgtggcacaatgaggcggcgttacgag
gacgatggtatctccgatgacgaaattgaagggaagaggacatttgaccttgaggaaaag
ctctccaccaacaagttcaattctaccttcgtcatcttcatggaaggcaaagactttaca
gttgaatacatccagcgaggtggcctgagagaccccctcatcttcaggagctctgatggc
ctgggtataaagatgccagatccggacttcagcgtgaacgatgtgcggctgtgtgtcggg
agccggcggatggtggatgtcatggatgtaaacacacagagggacatagagatgtccatg
gcacagtgggcacgctactatgaaacacctgaagctgaacgggagaaactttacaatgtc
atcagcctggagttcagccacaccaaactggaaaacctggtgcagagacctgctacggtg
gatttgattgactgggttgataacatgtggcccaggcacctgaaggagagtcagacagag
tctacgaatgctattctagagatgcagtatccaaaagtacagaagtactgtctgatgagt
gtcaagggctgctacaccgatttccatgtggattttggtggtacttctgtgtggtaccac
atccaccgaggaggaaagatcttctggttgatccctcctacaccccagaacctggagctc
tatgaaaactggcttctctcagggaagcagggagacatatttcttggagatagggtgtca
gagtgccagcgcatcgagctcaagcagggctatacgtttgtcatcccctcaggttggatc
catgctgtgtacactcccatggacacactggtttttggaggcaacttcttgcacagcttc
aacatccctatgcagctccggatctacagcatcgaagaccgcacgcgggtcccaaacaag
tttcgttatcccttctattatgagatgtgttggtacgtgctggagcgctatgtctactgc
atcaccagccgctcacatctcaccaaggacttccagaaggaatcactcagcatggatatg
gagctgagctcctcagactcagtaaacatggaggaagaggaggaggaagaagaggatgca
gcagggaaggaaccaaggagaccgatcacgagacggtctgttcttaccagccccgtagcc
aatggtgccaatgtggactatgatgaactgagcaggagctgccggagcagcctgccggct
ctgaagaagagcccatctatagactcctctgactctagccgaggctcccagaatggccag
gcctgggagccacatggtggcagtccacgcaagagcaggagggtgcacctgacgcagttt
gagctggaggggctgcgctgcctggtagacaagctagagtcactccctctgcacaagaag
tgcgttcccactggcatcgaggacgaggatgctctcatcgctgatgtcaagctgctgcta
gaagaatacgcaaacagtgatcccaaactggcacttacaggcatccccattgtccagtgg
cctaagagagacaagctaaagctgcaggcccggctgagagtgcgcctgcccaccatcccc
atcaccaagcctcacaccatgaagccaaccccacgcccaacgcccatcaggcctacgatg
tcccccatcgtgtcaggtgcccgacggaggcgtgtgcgctgccggaaatgcaaggcctgc
atgcaaggcgagtgtggcatgtgccactactgcagggacatgaagaagtttggtggacct
ggtcgtatgaagcagtcctgtgtcctccggcagtgcttagcgcccaggctgcctcactcg
gtcacatgtgcgctttgcggggaggtggatcagaatgaggactcgcaggactttgagaag
aagctcatggagtgctgcatctgcaatgagattgttcaccctggctgcctgcagatggat
ggggaagggctactcaatgatgagctccccaactgctgggaatgtcccaaatgctaccag
ggtgacgacacagagaagggccagaagcgcaaggtagaagagagcgatgatgacatggca
caagccaaggtgctgcgacccctgcggagctgtgaggagcccctgaccccgccacccaac
tcgcccacccccatgctacagctgatccacgacccggtgtcaccgcgaggtgtggtaaca
cgctcgtccccaggcgccggtcccagcgagcaccacagtgccagcagggatgagcgattc
aagcggcgccagcttctgcggctccaggccacggagcgaaccattgtgagggagaaagag
aacaaccccagtggcaagaaggagctgtcagaggtggagaaggccaagctgcatggctcc
tacctcaccgtgacgctccagcgccccaccaaagatgtccatggcacttccattgtcccc
aagctgcaagccatcaccgcctcctctgccaacttgcagcactctccccgcgtggtgatg
cgccacacgcctgcccggatgcacccgcggggtgggggggaggacgaggtggccgctgag
gaggacgaggaggacgaggatgaagatgacgagaacatggaggaggggggggctgcccgc
ctcaatggcagagggggccgggtgcaggagggtgaggagagctggatgcagcgcgaggtg
tggatgtctgtcttccgctacctcacccgcagggagctctgcgagtgcatgcgggtgtgc
aagacctggtacaagtggtgctgtgacaagagattgtggacaaaaatagatttgagcagg
tgcaagtccatcaccccccaggcactgagcggtatcatcaaaagacagcctatcagcctt
gacctcagctggaccaacatctccaaaaagcagctcacatggcttgtcaacagactgcca
ggcctgaaagacctcatcttagcaggctgttcctggtctgcagtctgcgctctcagtacc
tccagctgcccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccct
cagattcgggacttgctcacacctccgacagataaacccagtcaggacaatcgcagtaaa
ctccgtaacatgattgatttccggcttgctggcctggacatcaccgatgccacgctgcgg
ctgatcatccgccacatgcccctgctctcccgcctcgaccttagccactgcaaccacctt
acagaccagtctgccaacctcctcacggctgtgggctcttccacacgcaactccctcact
gagctcaacatggcaggctgcaataagctgacagaccaggccttgctgtacctgcgccgc
atctccaacgtcaccctcattgacctgcgaggttgcaagcagatcactcgcaaagcctgt
gagcacttcatctcagatctgtccatcaacagcctctactgcctgtccgatgagaagctg
atccaaaaaatcagctag
DBGET
integrated database retrieval system
