Gallus gallus (chicken): 427727
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Entry
427727 CDS
T01006
Symbol
TAP1
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga02010
ABC transporters
gga04145
Phagosome
gga05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
427727 (TAP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
427727 (TAP1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
427727 (TAP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gga02000
]
427727 (TAP1)
Enzymes [BR:
gga01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
427727 (TAP1)
Transporters [BR:
gga02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
427727 (TAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
SMC_N
AAA_16
AAA_25
AAA_29
Rad17
AAA_22
AAA_5
Erv26
AAA_18
Motif
Other DBs
NCBI-GeneID:
427727
NCBI-ProteinID:
NP_001129440
CGNC:
53176
Ensembl:
ENSGALG00000035075
UniProt:
A5HUM0
B5BSK4
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All DBs
Position
16:complement(2595948..2601142)
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AA seq
583 aa
AA seq
DB search
MGTMGAGRRLLLSLSPERRRCAAVMGLMAASALGEMAVPYYMGRASDWVAREDKLAAILP
MVLLGLSSAVTELVCDVTFVGTLSRTQSRLQRRVFAAVLRQSITELRADGAGDVAMRVTR
DAEDVREALGKALSLLLWYLARGLCLFATMAWLSPRMALLTALALPLLLALPRAVGHFRQ
ALAPQMQKAQARASEVAVETFQAMATVRSFANEDGAAAHYRQRLQQSHRLEKKDVALYTA
SLWTSGFSALALKMGILYYGGQLVAAGTVSTGDLVTFLLYQIQFTDVLRVLLDYFPTLMK
AVGSSEKIFEFLDREPQVAPSGTMAPADLQGHLQLEDVWFSYPGRQEPVLKGVSLELRPG
EVLALLGPPGAGKSTLVALVSRLHQPTAGRLLLDGHPLPAYQHSYLCRQVAVVPQEPLLF
ARSLHANISYGLGGCSRAQVTAAARRVGAHDFITRLPQGYDTEVGELGGQLSGGQRQAVA
IARALLRDPRILILDEHTSALDTESQQQVEQEILAAKGSGRAVLMVTGRAALAARAQRVV
VLEGGEVRQEGPPHEVLRPGSLLRDWGQQGAPGEGDRGSGGEG
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggggacgatgggcgcgggtcgccgcctcctcctctcgctgagcccggagcgccggcgc
tgcgccgcggtgatgggtctgatggcggcttcggcgctgggcgagatggccgtgccctac
tacatggggcgagccagcgactgggtggcccgcgaggacaagctggcagccatcctgccc
atggtgctgctgggcctcagcagcgctgttactgagctggtgtgtgatgtgaccttcgtg
gggacactgagccgcacgcagagccgcctccagcgccgcgtcttcgccgccgtcctgcgg
cagagcatcaccgagctgcgcgccgatggggccggggatgtggccatgcgggtgacgcgg
gatgcggaggacgtgcgcgaggcgctgggcaaggcgctgagcctcctgctgtggtatctg
gcacgcggcctctgcctctttgcaaccatggcctggctgtccccgcgcatggcgctgctc
accgcgctggcgctgccactgctgctggccctgcccagggctgtggggcacttccggcag
gccctggcaccacagatgcagaaggcgcaggcccgggccagcgaggtggcagtggagacc
ttccaggccatggccactgtgcgcagctttgccaatgaggatggggcagctgcacactac
cggcagcgcctgcagcagagccaccgcctggagaagaaggatgtggccctctacactgcc
tctctctggaccagtggtttctcagccctggccctgaagatggggatcctctactatggg
gggcagctggtggccgcggggaccgtcagcactggggacctcgtcaccttcctcctctac
cagatacagttcactgatgtcctgagggtcctgctcgactacttccccacactgatgaag
gctgtgggctcttcggagaagatctttgagttcctggaccgggagccacaggtcgcaccc
tcagggacaatggcacccgctgacctgcagggccacctccagctggaggatgtctggttc
tcctaccctgggcgccaggaacccgtcctcaagggcgtatcactggagctgcgccccggg
gaggtgctggcactgctgggacccccgggcgcagggaagagcactctggtggccctcgtg
tcccgcctgcaccagcccacggccgggcgcctgctgctggatggccaccccctccccgcc
taccagcactcctacctgtgccgccaggtggccgtcgtcccccaggagccgctgctcttt
gcccgctcactccacgccaacatctcctatgggttggggggctgcagccgggcacaggtg
acagcggccgcccgccgggtgggcgcccacgacttcatcactcgcctgccccaaggctac
gacacagaggtgggcgagttgggaggacagctctccggggggcagcggcaggcggtggcc
attgcccgtgcactgctgcgggacccccgcatcctcatactcgacgagcacaccagcgcc
ctggacactgagagccagcagcaggtggagcaggagatcctcgcagccaaagggtcgggg
cgtgcagtgctgatggtgacggggcgggcagccctggcggcgcgggcacaacgagtggtg
gtgttggaggggggagaggtgcggcaggagggacccccccacgaggtgctgcgccccggc
agccttctgcgggactggggacaacagggagcaccgggggagggggacagagggagtggg
ggggagggatag
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integrated database retrieval system
