Geobacillus sp. GHH01: GHH_c11910
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Entry
GHH_c11910 CDS
T02455
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ggh
Geobacillus sp. GHH01
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ggh03016
]
GHH_c11910 (truB)
Enzymes [BR:
ggh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GHH_c11910 (truB)
Transfer RNA biogenesis [BR:
ggh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GHH_c11910 (truB)
Prokaryotic type
GHH_c11910 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AGE21729
UniProt:
L7ZX61
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All DBs
Position
1160476..1161384
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AA seq
302 aa
AA seq
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MDGVLLLNKPKGMTSHDCVAKVRRLLGVKKAGHTGTLDPNVSGVLPICLGKATRIAEFLT
GTTKTYEGKVTLGAATTTEDADGDIIAARPVDRPIARAEIEAVFDSLTGEIEQTPPMYSA
VKVGGKKLYEYARAGIEVERPTRRVTIYELELLDEREQFFGETVSFRFRVTCSKGTYVRT
LAVMIGERLGYPAHMSDLIRTASGPFRLEDCVTFEDVERRAADGTADALLIPIERALFHL
PKYEINDKVAEKVKNGALLRLPAFLEKLDGPVVLVSPEREALALYVKHPARPGLMKPLKV
FR
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggacggggtattgctgctgaataaaccgaaagggatgacgtctcacgactgcgtggcc
aaagtgcgccgtctgcttggcgtaaaaaaagcgggacacaccggcacgcttgacccaaac
gtgtccggtgtgctgcccatttgccttggcaaggcgacgcgcatcgccgagtttttgacc
gggacgacgaaaacgtatgaaggaaaagtgacgcttggcgccgcgacgacaaccgaagat
gcggacggcgacatcatcgccgcccgtccggttgaccggccgattgcgcgcgcggaaatc
gaagcggtgtttgacagcttgaccggagaaattgagcaaacgccgccgatgtactccgcg
gtgaaagtgggcggcaaaaaactgtatgaatacgcgcgcgccggcatcgaagtcgaacgt
ccgacgcggcgcgtgaccatttatgagctcgaactgcttgatgaacgtgaacaattcttt
ggggaaacggtgtcatttcgctttcgcgtcacgtgcagcaaaggcacgtacgtgcgtacg
ctggcggtgatgatcggcgagcggctcggctatccggcgcatatgtccgacctcatccgt
acggcgtccgggccgtttcggcttgaagattgcgtaacgtttgaagacgttgagcgccgg
gcggccgacgggacggctgatgccttgctcatcccgatcgagcgggcgctttttcatttg
ccgaaatatgaaatcaatgataaagtagcagagaaggtaaaaaacggggcgctgctccgg
cttcccgcttttttagagaagcttgacgggccggtcgtgcttgtttcgcccgagcgggaa
gcgctggccctgtacgtgaagcatccggcgcgccccggcttgatgaaaccgctcaaagtg
tttcgttaa
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