KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101145520Help
Entry
101145520         CDS       T02442                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    101145520 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ggo03400]
    101145520 (LIG4)
Enzymes [BR:ggo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     101145520 (LIG4)
DNA repair and recombination proteins [BR:ggo03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     101145520 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT DNA_ligase_IV DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme APG17 LIG3_BRCT
Motif
Other DBs
NCBI-GeneID: 101145520
NCBI-ProteinID: XP_004054771
Ensembl: ENSGGOG00000027771
UniProt: G3S2K5
LinkDB All DBs
Position
13
AA seq 911 aa AA seqDB search
MAASQTSQTVASHVPFADLCSTLERIQKSRGRAEKIRHFREFLDSWRKFHDALHKNHKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHG
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSA
LEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTD
QFGASPTEGSLTPFIHNAFKTDIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQAHTKNEVIDALNE
AIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKPFHRKAPPSSILC
GTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIRDDKEWHECMTLDDLE
QLRGKASGKLASKHLYIGGDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLTNVNKISNIFE
DVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSKNIRVKNIILSNKHDV
VKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFIDTDLNQLKEVFSG
IKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTVYLDSYAVINDLSTKNEGTRLAI
KALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKILKESWVTDSIDK
CELQEENQYLI
NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt
atggctgcctcacaaacttcacaaactgttgcatctcacgttccttttgcagatttgtgt
tcaactttagaacgaatacagaaaagtagaggacgtgcagaaaaaatcagacacttcagg
gaatttttagattcttggagaaaatttcatgatgctcttcataagaaccacaaagatgtc
acagactctttttatccagcaatgagactaattcttcctcagctagaaagagagagaatg
gcctatggaattaaagaaactatgcttgctaagctttatattgagttgcttaatttacct
agagacgggaaagatgccctcaaactcttaaactacagaacacccactggaactcatgga
gatgctggagactttgcaatgattgcgtattttgtgttgaagccaagatgtttacagaaa
ggaagtttaaccatacagcaagtaaacgaccttttagactcaattgccagcaataattct
gctaaaagaaaagacctaataaaaaagagccttcttcaacttataactcagagttcagca
cttgagcaaaagtggcttatacggatgatcataaaggatttaaagcttggtgttagtcag
caaactatcttttctgtttttcataatgatgctgctgagttgcataatgtcactacagat
ctggaaaaagtctgtaggcaactgcatgatccttctgtaggactcagtgatatttctatc
actttattttctgcctttaaaccaatgctagctgctattgcagatattgagcacattgag
aaggatatgaaacatcagagtttctacatagaaaccaagctagatggcgaacgtatgcaa
atgcacaaagatggagatgtatataaatacttctctcgaaatggatataactacactgat
cagtttggtgcttctcctactgaaggttctcttaccccattcattcataatgcattcaaa
acagatatacaaatctgtattcttgatggtgagatgatggcctataatcctaatacacaa
actttcatgcaaaagggaactaagtttgatattaaaagaatggtagaggattctgatctg
caaacttgttattgtgtttttgatgtattgatggttaataataaaaagctagggcatgag
actctgagaaagaggtatgagattcttagtagtatttttacaccaattccaggtagaata
gaaatagtgcagaaaacacaggctcatactaagaatgaagtaattgatgcattgaatgaa
gcaatagataaaagagaggagggaattatggtaaaacaacctctatccatctacaagcca
gacaaaagaggtgaagggtggttaaaaattaaaccagagtatgtcagtggactaatggat
gaattggacattttaattgttggaggatattggggtaaaggatcacggggtggaatgatg
tctcattttctgtgtgcagtagcagagaagccccctcctggtgagaagccgtctgtgttt
catactctctctcgtgttggctctggctgcaccatgaaagaactgtatgatctgggtttg
aaattggccaagtattggaagccttttcatagaaaagctccaccaagcagcattttatgt
ggaacagagaagccagaagtgtacattgaaccttgtaattctgtcattgttcagattaag
gcagcagagatcgtacccagtgatatgtataaaactggctgcaccttgcgttttccacga
attgaaaagataagagatgacaaggagtggcatgagtgcatgaccctggatgacctagaa
caacttagggggaaggcatctggtaagctcgcatctaaacacctttatataggtggtgat
gatgaaccacaagaaaaaaagcggaaagctgccccaaagatgaagaaagttattggaatt
attgagcacttaaaagcacctaaccttactaacgttaacaaaatttctaatatatttgaa
gatgtagagttttgtgttatgagtggaacagatagccagccaaagcctgacctggagaac
agaattgcagaatttggtggttatatagtgcaaaatccaggcccagacacgtactgtgta
attgcagggtctaagaacatcagagtgaaaaacataattttgtcaaataaacatgatgtt
gtcaagcctgcatggcttttagaatgttttaagaccaaaagctttgtgccatggcagcct
cgctttatgattcatatgtgcccatcaaccaaagaacattttgcccgtgaatatgattgc
tatggtgatagttatttcattgatacagatttgaaccaactgaaggaagtattctcagga
attaaaaattctaacgagcagactcctgaagaaatggcttctctgattgctgatttagaa
tatcggtattcctgggattgctctcctctcagtatgtttcgacgccacaccgtttatttg
gactcgtatgctgttattaatgacctgagtaccaaaaatgaggggacaaggttagctatt
aaagccttggagcttcggtttcatggagcaaaagtagtttcttgtttagctgagggagtg
tctcatgtaatcattggggaagatcatagtcgtgttgcagattttaaagcttttagaaga
acttttaagagaaagtttaaaatcctaaaagaaagttgggtaactgattcaatagacaag
tgtgaattacaagaagaaaaccagtatttgatttaa

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