KEGG   Gossypium hirsutum (upland cotton): 107886412
Entry
107886412         CDS       T04793                                 
Name
(RefSeq) DNA repair endonuclease UVH1-like isoform X2
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    107886412
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ghi03032]
    107886412
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107886412
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    107886412
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107886412
SSDB
Motif
Pfam: ERCC4 CARD
Other DBs
NCBI-GeneID: 107886412
NCBI-ProteinID: XP_016665853
UniProt: A0A1U8HPF3
LinkDB
Position
D08:57259909..57264238
AA seq 967 aa
MVLKFHEQIVSDLLEDTNGGLVVLSSGLSLPKLLSSFISFHSRSSGSLLLLHPPQLSSSL
KSLLLSLSPDLPLSEITADLPSSNRLSLYSSNRILILSPRILIVDLLTQKAQTSLISGIV
FLNAHSLSESSTESFIVRIIKTFNKNASVYAFSDKPLSMVSGFAKTERTMKSLFIRKLHL
WPRFQVNVSEELERNPPEVVDIRVPMTKCMLGIQKAIVEVMDSCLKEMRKTNKVDVEDLT
VENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVSYLKYLDTL
RVSESFRSVWIFAESSYKVFDYAKKRVYRFAKSDDTKISTPSKNLARKKRKLKEDDNNND
EAIAGTSSTSTSNGVVLQEVLEESPKWKVLREVLEEIEEERKKQASSGEPLLDVEEEYNS
IILVACKDECSCMQLEDCITNGSQKVMRDEWQKYLLSKVELRGVQTPQKKKPKAPKGYGI
LDGIVAVTPARNAEVSSACKQENDALLAAAAEIKRNQAKKEKDAAKDPEPQVGSRGHGKG
KGRGRTRQGHARNKDGSNNTELANGDRPEVYGSENEGQINEINPTVIVDGVSGKNIDNDR
KADNPKQLPPVHFHALEREQPILDVLKPSVIIVYHPDMTFVREIEVYKAENPGKKVKVYF
LFYDASTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQNDFCLGLNSSLEIQGSSSQNS
ITRKAGGRKDAEKEMQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYVLSPLICVERK
SIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPTNIISK
LSLLVLHFPRLRIIWSRSLHATADIFASLKANQDEPDETKAMRVGVPSEEGIIENDVRAE
NYNTSAVEFLRRLPGVTDSNYRTIMDGCQSLAELALLPIEKLAELMGGRKAAQTLRDFLD
AKYPTLL
NT seq 2904 nt   +upstreamnt  +downstreamnt
atggtcctaaaattccatgaacaaatagtctccgacctcctcgaagacacaaatggcggc
ctcgtagtcctttcctccggcctttccctcccaaaactcctctcttctttcatctctttt
cactcccgatccagcggctctctcctccttctccacccgcctcaactctcctcctccctc
aaatccctcctcctttccctttcccctgacctccctctctccgagataaccgccgatctc
ccttcctctaaccgcctctccctctactcctccaaccgtatcctcatcctctcccctcgt
atcctcattgttgacctcttaacccaaaaggcccaaacttccttaatttccggtatcgtt
ttccttaacgctcattcgctttccgaaagctcaactgaatctttcattgtcagaatcatc
aagactttcaacaaaaatgcttctgtttacgcgttttcagacaagcctctctctatggtt
tctgggttcgcgaaaacggagaggacgatgaagagtttgttcatcaggaagcttcatctt
tggccgaggtttcaagtgaatgtttcggaggaattggagaggaatccgccggaagtggtg
gatataagggtgccgatgactaaatgcatgttggggattcaaaaagccattgtggaagtt
atggattcttgcttgaaggaaatgaggaaaactaataaggttgatgtggaggatctaacg
gtggagaatgggttgtttaagtcatttgatgagattgtgaggaggcaattggatcccatt
tggcatactttggggaagaagacgaaacaactcgtttcggatttgaaaactttgaggaag
ttgttggattatcttgttaggtatgatgcagtaagttatctaaagtatttggatactctt
cgagtgtcagagagttttcgatccgtttggatattcgcagagtccagttataaggtattt
gactatgcaaagaagcgtgtttatcgttttgcaaagtctgatgataccaaaattagtacg
cctagcaagaacttggctagaaaaaagagaaaattgaaggaagatgacaacaataatgat
gaagcaattgctggtacttcatctacaagtacaagtaacggagtggttcttcaagaagtt
ttggaagagtctccaaagtggaaggtgttacgtgaggtccttgaagagatagaagaggaa
agaaaaaagcaagcatcatcgggagaaccattgttggatgttgaagaggaatataatagt
attattttagtggcatgcaaagatgagtgctcgtgcatgcaacttgaagattgcattact
aatggctcacaaaaggtcatgagggatgaatggcaaaagtacctcctaagcaaagttgaa
cttcgtggtgtgcaaactcctcagaagaaaaaacccaaagctcctaaaggttatgggatt
cttgatggtattgttgctgtaacacctgcccggaatgccgaagttagcagtgcatgcaag
caggaaaatgatgcattattagctgcagcagcagagataaaaagaaaccaagctaagaag
gaaaaggatgctgcaaaagatcctgaacctcaagttggcagcagaggacatgggaaaggg
aagggaagaggaaggactagacaaggccatgctaggaataaagatggctccaataatact
gagctagcaaacggtgatagacctgaagtttatgggtcagaaaatgaaggccaaataaat
gaaatcaaccctactgtaattgttgatggggtttctgggaagaatattgacaatgataga
aaagcggacaaccctaagcagttaccaccagttcactttcatgctttggagagagagcag
cctatattagatgttttaaagccatctgtaattattgtttaccatccagatatgactttt
gttagggagattgaagtctacaaagctgagaatcctggaaaaaaggtgaaggtctatttt
cttttctatgatgcttctactgaagtccaaaagtttgaagcaagcatccgtagagaaaat
ggagcatttgaatctttgatcaggcagaaatcaatgatgatgatcccagttgatcagaac
gatttctgccttggtttaaattcttcattggagatacaaggttcaagttcccagaactca
atcaccagaaaggctgggggaagaaaggatgctgagaaggaaatgcaggtaatagtggac
atgagagagttcatgagtagtcttccgaatgtccttcatcagaagggcatgcgtataatc
ccagtaaccttagaagttggtgattatgttctctcaccacttatttgcgttgaaaggaaa
agcattcaagatctttttatgagtttcacatcaggtcgtctttaccaccaagtggaaact
atggttcgttattaccgaataccggttcttctaattgagttttcacaagacaaaagcttt
tcatttcagtctgcaagtgatattggtgatgatgtaacaccaactaatatcatatccaaa
ctgtcattacttgttctgcattttccccgcctacgaatcatctggtctcggagcttacat
gcaactgctgatatatttgcttctcttaaggcaaatcaggatgaacccgatgagacaaag
gcaatgagagttggtgtaccctcagaagagggtatcatagaaaatgatgttagagctgaa
aactacaatacatcagctgttgagtttttgagacgactcccaggagtaacagattccaac
tacaggactataatggatggatgtcaaagcttggctgaacttgcacttcttcctatagag
aagctagctgaactaatgggtggtcgaaaagctgcccagacattaagagatttcctcgat
gctaagtatccaaccttgttgtga

DBGET integrated database retrieval system