KEGG   Gossypium hirsutum (upland cotton): 107889882
Entry
107889882         CDS       T04793                                 
Name
(RefSeq) lysine-specific demethylase JMJ30
  KO
K24444  [histone H3]-dimethyl/trimethyl-L-lysine36 demethylase [EC:1.14.11.27 1.14.11.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ghi03036]
    107889882
Enzymes [BR:ghi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     107889882
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107889882
SSDB
Motif
Pfam: Cupin_8 JmjC_2 JmjC Cupin_2
Other DBs
NCBI-GeneID: 107889882
NCBI-ProteinID: XP_016669919
UniProt: A0A1U8I2M2
LinkDB
Position
D06:29856716..29863705
AA seq 419 aa
MSSPAANIATAISTPTLDSESPALLQSITSHGGYAFTRMATLAAAGDQRAAEAACEMAWE
QLHSGPWHSVLPVWRDAYSMACLHVAKFHFSNGEFRDALRSLDMGIIMGGPLLRKDLDSA
IEVVLAAKSRHYHNGVADDDKEGHGEAGSRLLVSPQEFDKSEVLQILPIRSLSSKIVGKR
SALSLEAFLCEYFLSGSPVIITDCMAHWPARTRWNDMDYLRRIAGDRTVPVEVGKNYLCS
EWKQELVTFSEFLERVQSTGCSSKAPTYLAQHQLFDQINDLRKDISIPDYCCAGGGELRS
LNAWFGPAGTVTPLHHDPHHNILAQVVGKKYVRLYSATYSEELYPYSETMLYNSSQVDLD
NIDEVEFPKLRDLEFIDCILEEGEMLYIPPKWWHYVRSLTTSFSVSYWWSTDSGSSMVS
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgtcctcccccgccgccaacatcgccaccgccatttcaaccccaactctagactccgag
tctcctgccctcctccaatccatcacctcccatggaggctacgcttttacccgcatggcc
actttagccgctgccggcgaccaacgcgctgccgaggccgcatgtgagatggcctgggag
caacttcactccggtccttggcactctgttctccccgtctggcgtgacgcttactccatg
gcctgcctacatgtggccaaattccatttctccaatggtgagttcagagatgctcttagg
tctttggacatgggcatcataatgggcggtcctttgcttaggaaagatttggactccgca
atcgaagtcgttttggccgccaagtccaggcactatcataacggagtagctgatgatgat
aaagaaggtcacggagaggcagggtcccgattgctggtttctccacaggagttcgataag
tccgaggtgctacaaattttaccaataaggtcattgtcttccaagattgtggggaagagg
tccgccctatctttggaggcatttctatgtgaatatttcctctcaggttctccagttata
attactgattgtatggctcactggccagctaggacaaggtggaatgatatggattattta
agaaggattgctggtgatcgtactgtcccagttgaggtaggaaaaaactacttgtgttca
gagtggaagcaagagcttgttacattttccgagtttcttgagagggttcaatctacaggc
tgcagtagtaaggcccctacatatttggcacaacaccaattgtttgatcagataaatgat
ttgcggaaagacatttctattccagactattgttgtgctggtggtggggagctgagatct
ctcaatgcatggtttggtccagctgggacggttacacctttgcaccatgatccacaccat
aatatccttgctcaggttgttggtaagaagtatgtgagactctactctgctacatattct
gaggagctttacccatacagcgaaaccatgctctacaattccagccaggttgatctggac
aacatagatgaggtagagtttccaaagttgcgtgacttagaattcatagactgcatttta
gaggaaggtgaaatgctttatatcccaccgaaatggtggcattatgtgagatcattaacg
acaagtttttcagtcagctattggtggagtactgattctggaagttcaatggtgtcttag

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