Gossypium hirsutum (upland cotton): 107893983
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Entry
107893983 CDS
T04793
Name
(RefSeq) serine/arginine-rich splicing factor SC35
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107893983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107893983
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
SR proteins
107893983
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107893983
NCBI-ProteinID:
XP_016674631
UniProt:
A0A1U8I8T4
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All DBs
Position
A13:complement(15610649..15614733)
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AA seq
255 aa
AA seq
DB search
MSHFGSSGPPDISDTYSLLILNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGDSRGFA
FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIHKGRIVESAPRSGHRSRSR
SPRRRHRDDHYRDRDYRRSRSRSHDRYERDRYRGKDKDSRRRSRSRSASPDYSKGRGRGR
YDDDRRSVSRSISASPARRSPSPRKSTSPRKSPPRGESPDRRSRDGRSPSRRSVSPRGRL
ADSRSPSPQNSDVDE
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttcggaagttcagggccgcccgacattagcgatacttactctcttctcatc
ctcaacatcacctttcgcaccactgctgatgatttgtttccgcttttcgacaagtacggc
aaggtggtcgacatcttcattcccaaagatcgaaggaccggtgattctcgaggttttgca
tttgttcgctacaagtatgcggatgaggcacaaaaagctgtggataggctcgatgggaga
gtcgttgatggtcgggaaataacagttcagtttgcaaaatacgggcctaatgcagagagg
attcacaaaggaaggatagttgaatcagcaccaagatcagggcacaggtcaagaagccgc
agtcctcgcagaaggcaccgtgatgaccattacagagatagggattatagaagaagtcgt
agtagaagtcacgacaggtatgaacgtgatcgctatcgtgggaaagacaaagattctcgg
cgccgtagcaggagtcgcagtgctagtcctgactattctaaaggccgaggaagaggccgc
tatgatgatgataggcggagtgttagtcgatcgataagtgcttctcctgctcgccgcagc
cctagtcctcggaagagtacttcccctcgtaagtctccccctaggggtgaaagtcctgat
agacgtagccgtgatggacgatctccaagtcgtcgaagtgtttcaccacgaggccgtcta
gctgattctcggagtccatctcctcaaaactccgatgttgatgaatga
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