Gossypium hirsutum (upland cotton): 107899374
Help
Entry
107899374 CDS
T04793
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00906
Carotenoid biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
107899374
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ghi01006
]
107899374
Enzymes [BR:
ghi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
107899374
Prenyltransferases [BR:
ghi01006
]
Terpene biosynthesis
Squalene/phytoene synthase
107899374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
107899374
NCBI-ProteinID:
XP_016680559
UniProt:
A0A076L2S9
LinkDB
All DBs
Position
A07:complement(10721992..10724210)
Genome browser
AA seq
418 aa
AA seq
DB search
MSLKLLWFVSSQSNLGFLHHGNRSLPCPNLLFQHRAGKGKNQRWKPHFCSSRTHVPGSEG
LRRSKVKVTVVSTMAATSSAGEIAMSSEEKVYNVVLKQAALVNKQLRSPRVDVVVPGDLS
LLNEAYDRCGEICAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNAPHITPT
ALDRWESRLEDLFNGRPFDMLDAALANTVNKFPVDIQPFKDMIEGMRMDLRKSRYKNFDE
LYLYCYYVAGTVGLMSVPVMGIAPESLASTESVYNAALALGIANQLTNILRDVGEDAQRG
RIYLPQDELAQEGLSDEDIFSGKVTDKWRNFMKKQIKRARMLFHEAEKGIKELNVSSRWP
VSASLMLYKQILDEIEANDYNNFTKRAYVSKAKKLIALPVAYVRSLVAPSTIRSSHRT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaagttgctttggtttgtatcttcccaatcaaacttggggttccttcatcat
gggaaccggtccttgccatgtcccaatttgttgttccaacacagagcaggtaaaggtaag
aaccagagatggaaaccccatttttgttcttcaaggactcatgttcctggttcagaaggg
ttaagaagaagcaaggtgaaggtcactgttgtgtcaaccatggcagccactagctcagca
ggtgaaatagctatgtcatcagaggagaaggtttacaatgtggtgttgaaacaggcagct
ttggttaataagcaattgagatcacctcgtgtggatgtcgttgtacctggtgatttgagc
ttgttaaatgaagcatatgatcgttgtggtgaaatttgtgccgagtatgcaaaaaccttt
tatttgggaactttgctgatgacccctgaaagacgtagggctatatgggctatctatgta
tggtgtcggaggaccgatgagctcgttgacggaccaaatgcaccgcatataactcccact
gctttagataggtgggaatccaggttggaagatctattcaacggtcgtccgtttgatatg
ctcgatgccgctttagccaacacggttaataaatttccagtcgatattcagcctttcaaa
gacatgatagaaggaatgaggatggacttaaggaaatccagatacaaaaacttcgacgaa
ctatatctctattgttattatgtagccggcactgtcgggttgatgagtgtgcctgtgatg
ggcattgcacctgaatctttagctagcacagagagtgtgtataatgctgcattagcatta
gggatagctaatcaactcactaatatactcagagatgttggggaagatgcgcaaagggga
agaatttatctaccacaagatgagttagcacaggaaggactatcagatgaggatattttt
agtggaaaagtaacagataagtggaggaacttcatgaagaaacaaataaagagggcaaga
atgttgtttcatgaggcagaaaaaggaattaaagagctaaatgtatcgagtcgatggccg
gtatcggcatcattgatgctatataagcagatattagatgagatagaggccaatgattat
aacaactttacaaagagagcttatgtaagcaaagcaaagaaattaattgccctccctgtt
gcatatgttagatctctcgtggctccatcaacaattcgttcttctcatcggacttaa
DBGET
integrated database retrieval system
