Gossypium hirsutum (upland cotton): 107902878
Help
Entry
107902878 CDS
T04793
Name
(RefSeq) replication protein A 32 kDa subunit B
KO
K10739
replication factor A2
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03030
DNA replication
ghi03420
Nucleotide excision repair
ghi03430
Mismatch repair
ghi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107902878
03420 Nucleotide excision repair
107902878
03430 Mismatch repair
107902878
03440 Homologous recombination
107902878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
107902878
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107902878
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107902878
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107902878
MMR (mismatch excision repair)
107902878
DSBR (double strand breaks repair)
HR (homologous recombination)
107902878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
RMI2
tRNA_anti-codon
DUF5666
HTH_29
Motif
Other DBs
NCBI-GeneID:
107902878
NCBI-ProteinID:
XP_040948914
LinkDB
All DBs
Position
D05:complement(486053..490569)
Genome browser
AA seq
286 aa
AA seq
DB search
MQANEFDGNAAFAGGGFMPFQATQTAPDRPSSSSKNSDARCLTPVTVKQLKDLSKVGESG
ISIDGVDVNNIVLVGIISKIDNAVSDCTFRVDDGTGWVECTKWIHEHVDSVEVDVLSVGM
YVRVYGQFKSIQSRRSIHTFSIRPITDFNEIAHHFLECIYVHLYNTKLRLRMTNATDGMT
AQPQVANSYSGNHIMGYSYQTNSTSQFSNQYNTDEEQIRGISSMVLQYLRRPACLASEMG
VSSDIVARELNVSVDKVRKTLDFLASRALFTQPLMITTNLQMPEVC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgaacgagttcgatggaaacgcggcctttgccggaggcggattcatgcctttt
caggctactcagaccgctcccgaccgtccatcctcttcctccaaaaacagtgatgcgcgt
tgtttgactccagttacagtaaagcagttgaaggatctctctaaagttggagagtctggt
atttccattgacggtgttgatgtcaataatattgtattggtgggaatcatatccaagata
gacaatgctgtttcagattgtacttttagagttgatgatggcacaggatgggttgaatgc
accaaatggattcatgaacatgtagactcagttgaagtagatgtgctttcggttggaatg
tatgttcgtgtctatggccagttcaaaagcattcaaagtagaaggtccatacacaccttt
tcaattcggccaattactgattttaatgagattgcacaccacttccttgagtgtatatat
gttcatttgtacaacaccaagttgaggcttcggatgacaaatgcaactgacggtatgact
gctcagccccaggtggcaaattcatattctggcaaccatataatgggttacagctaccaa
actaactcgacaagccagttttctaaccagtataacactgatgaagaacagatccgtggt
attagttcaatggtcctacaatacttgcgtcggccagcatgccttgcatccgagatgggg
gtaagctctgatatcgtggctcgagaactaaatgtttcagtggataaagtcaggaaaact
ttggactttcttgcatcgagggcgttgtttacacaaccactgatgatcactacaaattta
cagatgcctgaggtatgttga
DBGET
integrated database retrieval system
