KEGG   Gossypium hirsutum (upland cotton): 107903283
Entry
107903283         CDS       T04793                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03420  Nucleotide excision repair
ghi04120  Ubiquitin mediated proteolysis
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107903283
   04120 Ubiquitin mediated proteolysis
    107903283
  09124 Replication and repair
   03420 Nucleotide excision repair
    107903283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107903283
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107903283
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     107903283
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   107903283
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     107903283
   Cul2 complex
     107903283
   Cul3 complex
     107903283
   Cul4 complex
     107903283
   Cul7 complex
     107903283
   Cul8 complex
     107903283
   Cul9 complex
     107903283
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      107903283
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      107903283
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_11 zf-RING_16 RH_dom
Other DBs
NCBI-GeneID: 107903283
NCBI-ProteinID: XP_016684799
UniProt: A0A1U8J9B2
LinkDB
Position
D05:2989668..2991335
AA seq 101 aa
MSTQTSGSTAPSKHFDMKKWSSVAFWSWDIVVDNCAVCRNHIMDLCIECQANQIHGADNE
CTVAWGACNHAFHFHCISRWLQNRSVCPLDNAEWEFRKYGR
NT seq 306 nt   +upstreamnt  +downstreamnt
atgtctacccaaacttccggcagcaccgccccttccaagcacttcgacatgaaaaagtgg
agttcggttgccttctggtcctgggatattgtcgtggataattgtgcggtttgcaggaat
cacatcatggatctctgtatcgaatgccaagccaaccaaatacacggtgccgataatgaa
tgcactgttgcgtggggtgcatgcaaccatgcattccactttcactgcatcagtcgatgg
ctgcagaaccggtcagtgtgtcctttggataatgctgaatgggagttccgaaagtatggt
cgctag

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