Gossypium hirsutum (upland cotton): 107905315
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Entry
107905315 CDS
T04793
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107905315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107905315
04147 Exosome [BR:
ghi04147
]
107905315
04090 CD molecules [BR:
ghi04090
]
107905315
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107905315
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107905315
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107905315
CD molecules [BR:
ghi04090
]
Proteins
107905315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
Zeta_toxin
AAA_29
AAA_22
RsgA_GTPase
AAA_15
AAA_5
nSTAND1
SbcC_Walker_B
APS_kinase
DUF815
AAA_25
DUF87
Rad17
DUF1360
Motif
Other DBs
NCBI-GeneID:
107905315
NCBI-ProteinID:
XP_016687433
UniProt:
A0A1U8JFC9
LinkDB
All DBs
Position
D01:63322675..63328584
Genome browser
AA seq
1328 aa
AA seq
DB search
MSKDSEEIKRIEQWKWSEMQGLELVSDPSLNPKIQTEEASSSSCSKLESDNNGGNEEKLQ
QEVPSIGFNELFRFADGLDYVLMGIGSLGALVHGCSLPIFLRFFADLVNSFGSNANNMDK
MMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYLEAALNQDIQYFDTE
VRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLGVVPLI
AVIGAIHTITLAKLSAKTQEALSQGGNIVEQTIVQIRVVSAFVGESKALQAYSSALKVAQ
KIGYKTGFGKGMGLGATYFVVFCSYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLGL
GQSAPSMSAFAKAKVAAAKIFRIIDHKPGIDRDSESGLELESVTGLVELRNVDFAYPSRP
DVKILNNVSLCVPSGKTIALVGSSGSGKSTVVSLIERFYDPTSGEVMLDGHDIKTLKLRW
LRSQIGLVSQEPALFATTIKENILLGRPDANDIEIEEAARVANAHSFIVKLPDGFDTQVG
ERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVI
AHRLSTIRKADLVAVLQEGSVSEIGTHDELMAKGENGAYAKLIRMQEAAHETALNNARKS
SARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLEGYHPNYRMEKLDFKEQ
AGSFWRLVKMNSPEWIYALFGSIGSIVCGSLSAFFAYVLSAVLSVYYNPDHAYMIREIGK
YCYLLIGLSSAALLFNTLQHSFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARI
AARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVL
QKMFMKGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSENKIVRLFSSNLQTPLKHCFWK
GQIAGSGFGVAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTL
APDFIKGGRAMQSVFELLDRKTEIEPDDPDATQVPDRLRGEVELKHVDFSYPSRPDIPIF
RDLNLRARAGKTLALVGPSGCGKSSVIALIQRFYEPSSGRVMIDGKDIRKYNLKSLRKHI
SIVPQEPCLFATTIYENIGYGHESATEAEIIEAATLANAHKFISSMPDGYKTFVGERGVQ
LSGGQKQRIAIARALVRKAELMLLDEATSALDAESERSVQEALHRACSGKTTIVVAHRLS
TIRNAHVIAVIDDGKVAEQGSHSHLLKNYPDGCYARMIQLQRFTNSQVFEMTSGSSSSKQ
KEVNEREG
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagattcagaagagataaagaggatagaacaatggaaatggtctgaaatgcaa
ggccttgaacttgtttctgatccttctttaaaccccaaaattcaaacagaagaagcttct
tcttcatcttgttcaaagcttgaaagtgacaacaatggtggaaatgaagagaagctacaa
caagaagtgccttcaattgggttcaatgaattatttagatttgcagatgggttagattat
gtattaatgggaattggttcacttggagctcttgttcatggctgttctttacctattttc
cttcgtttctttgctgatcttgttaattcctttggttctaatgctaataatatggacaag
atgatgcaagaagttctgaagtatgcgttttatttccttgtggtgggtgctgcaatttgg
gcatcttcatgggcagaaatttcatgttggatgtggactggtgaaagacaaacaacaaag
atgagaattaagtatttagaagcagctttgaatcaagacattcaatattttgatactgaa
gttagaacatctgatgttgtttttgccattaatactgatgctgtaatggttcaagatgct
attagtgagaagttgggtaatttcattcattacatggcaacatttgtgtctggctttgtg
gtgggtttcacagcagtatggcaattagctttggttacacttggagttgttccattaatt
gctgtaattggagcaatacataccataacattagctaaactctctgctaaaacacaagaa
gctttatcacaaggtgggaacattgtggaacagacaatagttcaaatccgggttgtttcg
gcttttgtcggtgaatcgaaagcattacaagcttactcatcagcattgaaagtagcacaa
aagataggttataaaactggatttggaaagggaatgggattgggggcaacctactttgtt
gtgttctgttcttatgctttgcttctttggtatggaggttatctggttagacatcattac
actaatggaggacttgccattgccaccatgtttgcagttatgattggtggattgggtttg
ggacagtctgcaccaagcatgtctgcatttgcaaaggctaaagtggcagcagcgaaaatt
ttccgtattatcgatcataaacccggtatcgatagagatagcgagtcgggtttggagttg
gaatcggttaccggtttagttgagttgagaaatgtggattttgcatacccttcaagaccc
gatgtaaagattcttaacaatgtttccttatgtgttccttctggaaaaaccatagctttg
gtcggaagtagcggttcggggaaaagcaccgtggtatcacttattgagagattttacgat
cctacttcaggggaagtgatgctagatggacacgacataaagacattaaagctaagatgg
ttaaggtcacaaataggacttgtaagccaagagcctgcactttttgctaccaccattaaa
gaaaacatccttttagggaggcctgatgcgaatgatatcgagattgaagaagctgcgagg
gtggctaatgctcattcattcattgtgaagctacctgatggtttcgacactcaggttggg
gagagaggacttcaactctcaggtggacagaagcaaagaatcgctatagcgagggcaatg
ttgaagaatccagcaatcctgttattggatgaagctactagtgcactagattctgagtcc
gaaaagctggtgcaagaggcccttgatcggtttatgattgggaggactactctcgtaatt
gctcatcggctttccactattcggaaggctgatcttgtagctgtactccaggagggaagt
gtttcggaaatcggtacgcatgatgaacttatggccaaaggagaaaacggtgcttatgct
aaactcattcggatgcaagaggcagcacacgaaactgcccttaataatgctagaaaaagt
agtgcaaggccatctagtgctcggaactcagtaagctcaccaatcattgcccggaattca
tcatatggccgctcaccatattcacgcaggctgtctgacttctctacttcggattttagc
ctttcccttgagggataccaccctaattaccgaatggaaaagcttgatttcaaggagcag
gcgggttccttctggcgtcttgtgaaaatgaattcacccgaatggatttatgctttattt
ggttctataggatccattgtttgcggctcccttagcgctttctttgcttatgtgctgagt
gctgttctcagtgtctactacaacccagaccatgcttacatgattcgagaaatcgggaaa
tactgctatctgttaattggactttcatcggctgcacttctcttcaacacactacagcat
tctttttgggatattgtgggagaaaatctcacgaaacgagtgcgagagaagatgctgact
gcagtgctgaaaaatgaaatggcatggttcgatcaggaggaaaacgagagtgctaggatt
gctgcaaggttagctcttgatgcgaacaatgtacgatcagctattggagaccggatttca
gttatcgtgcagaacacggcactcatgcttgttgcttgcactgctggttttgttttgcag
tggcgtcttgcccttgtcctcattgcagtcttccctgtggttgtagcagccaccgttttg
cagaaaatgtttatgaaaggtttctcaggagatttagaagctgctcatgccaaggccact
caactagctggagaggccattgccaatgtaagaactgttgctgcattcaattccgagaac
aaaatcgtccgccttttctcctcaaaccttcaaactccattgaaacactgcttttggaaa
ggacaaattgcaggaagcgggtttggggtagctcagtttgcactatacgcttcttatgca
cttggcctttggtatgcttcatggcttgtgaagcatgggatctctgatttttccaaaaca
atccgagtctttatggttcttatggtctctgccaatggtgcagccgaaacattgaccctg
gctccagacttcatcaaaggaggtcgagccatgcaatcagtctttgaacttcttgaccgt
aaaactgagatcgagcctgatgaccctgatgccacacaagttccagatcggcttcgtgga
gaagttgaactaaagcatgtagacttctcttacccttcacgtcctgacatcccaattttc
cgggaccttaatctccgcgcccgagccggaaaaacccttgcccttgttggtccaagtgga
tgtggtaaaagctcggttattgcacttatacaaagattttacgagccctcatctggacgt
gttatgatagatggaaaagacataaggaaatacaacctcaaatcgctgagaaaacacatt
tcaatcgttccacaagagccttgcctctttgctaccactatttacgaaaacattggctac
ggacatgaatctgcaaccgaggccgagatcattgaggcagctacactagccaatgcccac
aagttcatatcctcaatgcccgacggttacaaaacgtttgttggggagagaggggttcaa
ctttcaggaggccaaaaacagagaattgccatcgcaagggctctagtgaggaaagcagag
cttatgctgctcgatgaagcaaccagtgccctcgatgctgaatctgagagatcagtccaa
gaggctctacaccgtgcttgctcgggtaaaactacgattgtggtggctcatcggttatca
acaatcagaaatgctcatgtcattgcagtaattgatgatgggaaagttgcagagcaagga
tcccattcacatttactcaaaaactatcctgatggatgttatgcacggatgatacaatta
caaaggttcacaaatagccaagtttttgaaatgacctcaggctcaagctcgtcaaaacaa
aaggaagtcaatgaaagagaaggttaa
DBGET
integrated database retrieval system
