Gossypium hirsutum (upland cotton): 107905930
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Entry
107905930 CDS
T04793
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107905930
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
107905930
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107905930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TYW3
Met_10
Kelch_4
Kelch_1
Kelch_6
Kelch_3
Kelch_5
Kelch_2
MTS
DNA_methylase
Cons_hypoth95
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
107905930
NCBI-ProteinID:
XP_016688218
UniProt:
A0A1U8JHT2
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All DBs
Position
D05:complement(15374891..15380832)
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AA seq
1040 aa
AA seq
DB search
MDFDKRKASTLASLSSNEADKSPKGSLDTPIIPLINALNNHLSYFTTSSCSGRISILSQP
KPNPSSNNPTKKKARGGTWLFITHDTADSDSVISILFSDSTKLIQDSELVFRFEPLIIAV
ECRDLSSAQSLVSLAIACGFRESGITSVSKRLIVGIRCSIRLEVPLGDTQKIMVSEDYLK
FLVGVANEKMEANWKRTEGFLRAFRKSQDGTLENATGSKCSVSGGDCNEGQDGLERSFVD
AQNIVPSEKASFSRESLVETEGIPGCSLSISQMVIAGEPIERLFLWGHSTCTLESTNKAE
VLIFGGFGGSGSHARRHDSFLLDPLHGTLREINVAGRPSPRLGHTASLIGDCMYVIGGRA
DPTNILSELWILNTLKNEWRLLDCIGSAFPPRHRHAAAAVGSKIYVFGGLNNDAISSSLH
VLDTNTLQCEELIAHGEQPCARHSHSMVAYGSKLFMFGGYYGEALGDLYSFDTLTCSWEV
EKVGGRSPYARFSHSMFVYKNFIGIIGGCPVTQHCQELTLLDMRSLVWKHVTLSSMDKAL
FVRSTANVVRDDLIMVGGGAACYAFGTKFSEPMKINLFPLLSLDDHDSSRKLGENEVIKE
EEGMMENGNVLLQAPHVGTGSPQHPEMQSLNVETQTGQIDASSWVVKLEKKHAKLGKDIL
KKFGWLDLERKVYAQEDGLFISFPVTEKFCAIFSEDRFEVLSDHHPSKPFRAESLLLNDM
SSSVALDILKEYGATKLPDELVQKRKACKSPLKIMTEAVASLIRQKGLSDKLLEQLPNRW
ERIGDIVVLPISSFRDPIWNSIGEELWPIIAKSLNTCRLARQGRVAANGTRDSTLEILVG
DNGWVDHCENGILYSFDATKCMFSWGNLSEKIRMASSDCTDAVIVDLFAGIGYFVLPFLV
RAKAKLVYACEWNPHAIEALKRNLEANSVSDRCIILEGDNQITAPKGVADRVCLGLLPSS
EGSWLTAVRALRSNGGILHVHGNVKDTEVELWANHVSKSISEIARSEGHRWEVTIDHVEK
VKWYAPHIRHLVADVKCRRI
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggactttgacaagaggaaggcatcaacgttagcttcactgagctccaatgaagcagat
aaatcacccaaaggctctttagacacacccatcattcctctcatcaacgccctcaacaac
cacctttcttacttcaccaccagttcctgctctggccgtatctctatcctttcccaacca
aaacccaatcccagctccaataatcctaccaaaaagaaagcccgaggaggcacctggctc
ttcatcacccacgacacggctgattccgactcggtcatctccatactcttctctgactcg
actaagttgattcaagacagtgagttggtctttcgattcgagcctctcatcattgccgtt
gagtgtagagacttaagttcagctcagagtttggtttctttggcgattgcttgtgggttc
agagagtctgggattacaagcgtcagcaagagattgatagtggggatacggtgctcgata
cggttggaggtgcctttgggggatacccagaagattatggtgtctgaagattacttgaag
tttcttgttggggttgctaatgagaaaatggaagctaattggaagagaactgaagggttt
cttagagcatttcgaaaaagtcaggatggaacattggaaaacgcgactggttcaaagtgt
agtgtgagtggtggtgattgtaatgaaggtcaagatggtttggagagaagttttgtagat
gctcaaaacatcgttcctagcgaaaaagcaagtttttctcgtgaatcattggtggaaact
gaaggaattcccggctgcagtttatctattagtcagatggtaattgctggtgaacctata
gagagactgttcctttggggccattctacttgtaccttagaaagcacaaacaaagctgaa
gttcttatatttggtggctttgggggcagtggaagtcatgcgagaagacatgactctttt
ctccttgatccattgcatgggacattgagagaaatcaatgtggcgggccgtccatcacct
cgcctgggtcacactgcttctttaatcggagattgcatgtatgttattggaggcagggct
gatcctacgaacattctgagcgagttatggattctcaatacgttaaagaatgaatggagg
ctactagattgtattggcagcgcttttcctccaaggcatcggcatgcggccgctgcagta
ggatcaaagatttatgtctttggtggccttaataacgatgcaatctcttcatcattgcat
gttcttgacaccaatacactgcaatgtgaagaactaattgcccacggtgaacagccatgt
gctcgtcattctcactcaatggtggcatatggatctaagttattcatgtttggagggtac
tatggagaggctcttggggacttgtacagttttgatactctaacatgttcatgggaagta
gaaaaggtaggaggaagaagcccatatgctaggttctcccactccatgtttgtctacaag
aattttattggaataataggaggttgtcctgttacacaacattgtcaagagttgacatta
ctagatatgcgaagcctagtctggaagcatgtgaccctcagttcaatggataaagcactg
tttgtgcgttccacagccaatgttgttcgtgatgatcttattatggttggtggtggagca
gcttgttatgcttttggaaccaagtttagtgagcctatgaaaatcaacttgtttcctttg
ttatctctagatgatcatgacagttctcggaagctcggtgaaaatgaagttattaaggaa
gaggaaggtatgatggaaaatgggaatgttcttttacaagctccacatgttggaactggt
tcacctcaacatcctgaaatgcaaagcttaaatgttgagacccagacaggacagatagat
gcttcgagttgggttgtaaaacttgaaaaaaaacatgcaaaattaggaaaggacatattg
aagaagtttggatggttagatctagagagaaaagtttatgcacaagaggatggtttgttc
atctctttccctgtgaccgagaagttttgtgctatcttctcagaagacagatttgaagtt
ttgagtgatcatcatccatctaaaccatttagagctgaaagtttactcttaaatgacatg
tcctcctcagtagctctggacattcttaaggaatatggtgctactaagcttccagatgag
cttgttcaaaaaagaaaagcttgtaaatctcccttaaaaataatgactgaagctgttgcc
tctttgattaggcaaaaggggttatcagataaacttctggagcagctaccaaacaggtgg
gaacggattggtgatattgttgtgctaccgatttcatccttcagggacccaatatggaat
tcaattggagaggagctttggcccattattgccaaatcccttaatacttgtcgccttgca
cggcagggccgggttgctgcaaatggtacaagggacagtactttggagattcttgtagga
gataatggctgggttgatcattgtgaaaatgggattctatattcttttgatgctaccaag
tgcatgttctcttggggcaatctttctgagaaaatccgtatggccagttcagattgtaca
gatgcagtcatcgtggatctgtttgctggaattggatattttgtattgcccttccttgtt
agggcgaaagcaaagttagtctatgcttgtgaatggaatcctcatgccattgaggctctt
aaacgtaatcttgaagccaattctgtctctgatcgttgtatcatacttgaaggggataat
cagattacagcacccaagggagtggcagatcgagtttgtcttggtcttcttccatcaagt
gagggtagctggcttactgctgtgagggcattaaggagtaatggtgggatattgcatgtc
cacgggaatgtgaaggacaccgaggtggaattgtgggctaaccatgtttcaaaatcgata
tctgaaattgcaagatccgagggccatcgttgggaagttacaatcgatcatgtggagaaa
gtgaaatggtatgccccacacatccgccatcttgttgctgatgttaaatgcagacggatc
tag
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integrated database retrieval system
