Gossypium hirsutum (upland cotton): 107909631
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Entry
107909631 CDS
T04793
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107909631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107909631
Spliceosome [BR:
ghi03041
]
Complex A
U1 snRNP components
U1 related factors
107909631
Complex B
107909631
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
107909631
NCBI-ProteinID:
XP_016692727
UniProt:
A0A1U8JR28
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Position
D02:61360591..61366716
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AA seq
936 aa
AA seq
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MAESPSSPAALDTTNSQSKPDSDNPNPLPTQPDPSPSSTVSTQLQPNPNPSAPLVSPQPP
PAVPSYSTPPPPISGAATAVPPAPPSFRPVPQFSPLPNFQPPGLQPPGVSSAPGSIPPPL
MQYQVPAGQVPNPALRPFAPIPNGYAALPGAVPPGTMPPPGLLRYPSPYPAMIRPAFPPR
PPGAIGVMPTVSRPPVPGARPIIPPVIRPAVPNVTPTEKPQTTVYIGKIAPTVDNDFMLS
LLRLCGPVKSWKRPSNGTPKAFGLCDFESAEGVLRAVRLLSKFNIDGQELVVNVSQATKE
YLEKYVEKKTENAKKLNEPPSAESEKEGENAVGDVKNESSSTSVEDPKKNSDSGNRENIM
DIANSGIVTDEDREADRDASEKLAGMIEERLKTNPLPPPPPQTAPDGSGKSNSDLPAKSR
DGNSDIDLMRNDGAEGKNDDETTSESKATTENDRPETSSPDRRYDRSRDREQDLKRDKER
EIERLERETERERMRKEREQRRKIEEAEREYEKFLRDWEQREKDKEKQRQYEKEREKERE
RKRKKEIRYDEEDDDDEDSRKRLRRSVLEEKRRKRLREKEDDLADRLKEEKEIAEAKKRA
EEEQLQLQQQRDALKLLSGRFANGAAKNVLAEEPSTESKDKAVEQHYERESSHENQISGD
GNMQNGSVDESNVAFVSASDTRQSGNAPRKLGFGLVGSGKRTTVPSVFHEEEDDDAQKEK
KMRPLVPIDYSTEELQAVQPGAPAPNLVAAAEFAKRISNVNTKEEKSDAERERSRHFYDK
SSRDKDRNNEDSRNRDESKEKIPDRDRDREHGQDKVKTTDNQKLLDAKQLIDMIPKTKEE
LFSYEINWNVYDQHALHERMRPWISKKITEFLGEEEKTLVDYIVSGTQEHVKASQMLELL
QSILDEEAEMFVLKMWRMLIFEIKKVETGLALRSRS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatctccctcgtctccagccgccctagacacaaccaattcccaatctaaaccc
gactccgataatcctaatccactaccaacccaacccgatccatctccttcctctaccgta
tcaacacagctccaaccaaaccctaaccctagcgcccccctggtatctcctcaacctcct
cccgccgttccttcctactcgactcctccaccgccgatctccggagctgccacagccgtc
cccccggcgcctccttcgttccgtccggtcccgcagttttcaccgttaccgaattttcaa
cctcctggcttgcagccgcccggcgtgagttcggctcctggttctattccgccgccgttg
atgcagtaccaggtgcctgcgggtcaggttccgaatcctgctcttagaccgtttgctccg
attccaaatggatatgcagcgctaccgggagctgttcctccgggcaccatgcctcctccg
ggacttcttcgctatccctctccttacccagcaatgattcggcctgcattccctccacgc
ccacctggagctattggtgtgatgccaacagtttcacggcctcctgttcctggtgctcgc
ccaattattcctcctgtcattagaccagctgttcctaatgttactccaacagagaaacca
caaacaacagtttatattggcaagatagcaccaacagtggacaacgacttcatgctttct
ctccttcgtctttgtggacctgtcaagagttggaaacgcccctctaatgggacaccaaaa
gcatttgggctttgtgattttgagtctgctgaaggggttcttcgtgcagtgcgcctactt
agcaaatttaatattgacggacaagaactagtggtaaacgttagtcaagcaacaaaggaa
tatctggagaagtatgttgaaaagaaaactgaaaacgcaaagaaactaaatgaacctcca
tctgcagagtctgagaaggaaggtgaaaatgcagtaggtgatgtgaagaatgaatcttca
tcaacttctgttgaggatccaaagaagaacagtgacagtggcaacagagaaaatattatg
gacattgccaactctggcattgtcactgatgaagaccgtgaggctgatcgagatgcttca
gagaagcttgctggcatgattgaggagaggttaaagaccaatcctctcccaccacctcct
ccacaaactgctcctgatggttctgggaaatcaaattcagatttgcctgctaaatcaagg
gatgggaactctgatattgatttaatgagaaatgatggagctgaaggtaaaaatgatgat
gagactaccagtgagagcaaagcgacaactgaaaatgatcgacctgagacaagctcacct
gatcgtagatatgataggagtagagacagagagcaagatcttaagagggacaaggagcgt
gaaattgaaagattagaaagagaaacagagcgtgaaaggatgagaaaagagagggaacag
agaaggaagattgaggaggcagagcgtgagtatgaaaaatttcttagagactgggagcaa
agagaaaaggataaggagaagcagagacagtatgagaaggagagggagaaagagagggag
cgcaaacgaaagaaggagattcgctatgatgaagaagatgatgacgatgaagattcaaga
aaaaggctgcgtaggagtgttttggaggaaaagaggaggaagagattgcgggagaaggag
gatgacttggctgatagactcaaagaagagaaagaaattgctgaggccaagaaaagggca
gaggaggagcagttgcaattgcagcagcaacgagatgcgttaaagcttttgtctggtcgc
tttgcaaatggagctgcaaagaacgtgttggctgaagaacctagcactgaaagcaaagat
aaggcagttgaacagcattatgagcgcgaatcaagtcatgaaaaccagatatctggagat
gggaatatgcaaaatggttcagttgatgaatcaaatgtggcctttgtttctgcatcagat
acacggcagagtgggaatgcaccgaggaagttaggttttggtcttgttggatctggaaag
cggactactgtcccatctgttttccatgaggaggaagatgatgatgcacagaaggagaag
aaaatgaggcccctggttcccattgattactctactgaggaactgcaggctgtccaacct
ggcgcaccagcaccaaatctggttgcagctgctgaatttgcaaagcgaatatcaaatgtt
aacactaaagaggaaaagtctgatgcagaaagagagcgaagcagacatttttatgataaa
tctagtagggataaagatcgtaataatgaggacagtcgcaacagagatgagagcaaagag
aagatccctgatcgggatagagacagggaacatggacaggataaggtgaaaacaacagat
aaccagaagcttttggatgccaaacaactaattgatatgattccaaagaccaaggaggaa
ctattttcatacgagataaactggaatgtgtatgatcagcatgcattgcatgagagaatg
agaccctggatctcaaagaaaattacggagtttttgggagaagaagagaaaactctggtt
gattacattgtgtcgggtactcaggaacatgttaaggcttcccaaatgctggagctgctg
cagtctatattagatgaagaagcggagatgtttgtgcttaagatgtggaggatgctgata
tttgagattaaaaaagtagaaactggcctggctttgcggtcgagatcctga
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