Gossypium hirsutum (upland cotton): 107912366
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Entry
107912366 CDS
T04793
Name
(RefSeq) poly [ADP-ribose] polymerase 2-like isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107912366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
107912366
03036 Chromosome and associated proteins [BR:
ghi03036
]
107912366
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107912366
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
107912366
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
107912366
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
107912366
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
107912366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
WGR
SAP
Adeno_terminal
Motif
Other DBs
NCBI-GeneID:
107912366
NCBI-ProteinID:
XP_016695989
UniProt:
A0A1U8K5S7
LinkDB
All DBs
Position
D11:11208583..11214271
Genome browser
AA seq
645 aa
AA seq
DB search
MARKLKVGQLRDELAQRGLDTIGTKPLLVLRLEDALLKERKKEEENGGKANNAIGNNKRK
RGRESDVCNNEDSDKVNAVEEFRQMNVKQLREQATLRRLSTVGTKKELLERLCEDADKNP
LPVKEEEEEEEEEEEEEKESSKEEKIVTATKKGVAVLDQGIPDDIKAHYHVLQKGDDIYD
AMLNQTNVGQNNNKFFVIQLLESDDSKTYMVHNRWGRVGVKGQIKLHGPFTSRQAAIDEF
QTKFFNKTKNYWYNRKDFVCHPKCYTLLEMDYDEKEKESDVKRKANSSIGAQLRETKLEQ
RVAKFISIICNISMMKQQMMEIGYNADKLPLGKLSKSTILKGYDVLKKIADVIDQSNRSK
LEQLSSEFYTVIPHDFGFRKMRDFVIDTPQKLKKKLEMVEALGEIEVASKLLMDDITMEE
DPLYYRYQQLHCELFPLDNDTEEFAMIVKYIQNTHAQTHSNYTVDVVQIFAVRRDGESER
FKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANY
CYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATALDPSEAQSLDD
GVVVPLGKPKEQKRKGALLYNEYVVYNVDQIRMRYLIQVSFKYTK
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggaagctgaaagtaggccagctccgagacgaactcgcccagcgtgggcttgac
acaatcgggaccaagcccttactggtgctgagactggaggatgctttgctcaaggagagg
aagaaagaagaggaaaatggaggcaaggctaataatgcaatcggaaataacaagagaaaa
agagggagggaatcggatgtctgtaataacgaggattcggacaaagtcaatgccgttgag
gagtttcgacaaatgaatgtcaagcaattacgcgaacaagctactcttcgacgtctttcc
actgttggcaccaaaaaggaacttctcgagaggctttgtgaagatgccgacaagaatcct
cttcctgttaaagaagaagaagaagaagaggaagaagaagaagaagaagagaaggaaagt
agcaaggaggagaaaatcgttacggccacaaagaaaggggtggctgttctggatcaaggg
atcccagatgacataaaggctcattatcatgttctacaaaagggtgatgatatctatgat
gccatgttaaatcagacgaatgttgggcaaaacaataacaaattctttgtgatccagctt
ctagaatctgatgactcgaagacatacatggttcataacagatggggtagagttggtgtg
aagggtcaaattaagttacatggcccctttacttcacgacaagccgcaattgatgagttt
caaaccaaattctttaacaagaccaaaaactattggtacaacagaaaagactttgtttgt
cacccaaagtgctacaccttgctggagatggactatgatgaaaaagaaaaggaatctgat
gtcaaaagaaaggctaactcttccattggtgctcaattgcgggagacaaagcttgaacaa
cgtgttgctaagtttatctctattatatgcaatatcagcatgatgaagcaacaaatgatg
gaaataggatacaatgctgacaagttgcctcttggtaagctaagcaaatccacaatttta
aaggggtatgatgtcttaaagaaaattgctgatgtgattgaccagtcaaacaggagcaag
cttgagcaattaagttcggaattttacaccgtgattccacatgattttggatttagaaaa
atgcgtgattttgtcatcgacacacctcagaagttgaaaaagaagttggaaatggttgaa
gccctgggagaaatagaggtcgcatcaaaattattaatggatgacattacgatggaggaa
gatcctttatattatcggtaccaacagcttcactgtgaactgtttcctcttgacaatgat
actgaggagttcgctatgattgtaaagtatattcagaatactcatgctcagacacattca
aattatacagttgatgttgttcaaatattcgcggtgagaagagacggtgaaagtgaacgc
tttaaaaagttttctggaacaaaaaatagaatgctgttgtggcatggttctcggcttact
aactggactggcattctgtcccaaggtttgcgcattgctccacctgaagcgcctgccacg
ggttacatgtttgggaagggggtttactttgctgatatgttctccaaaagtgcaaattat
tgctatactaattctgccttcacgactggggtgttgcttctatgtgaggttgccctggga
gacatggctgagcttctacaagctaaaagcgatgctgataagctgccggatgggaagttg
agcacaaagggtgttggtgcaactgcactggatccctctgaagcccagtcacttgatgat
ggtgttgtagttcccctaggaaaaccaaaggagcaaaaacggaagggtgctttattatac
aatgaatatgtagtctacaatgtcgaccagataaggatgcgctacttgattcaagttagt
ttcaaatatacaaagtag
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