KEGG   Gossypium hirsutum (upland cotton): 107912765
Entry
107912765         CDS       T04793                                 
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
ghi  Gossypium hirsutum (upland cotton)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DRMBL DNA_ligase_A_C UBA_4 RMMBL Lactamase_B_2
Other DBs
NCBI-GeneID: 107912765
NCBI-ProteinID: XP_040937306
LinkDB
Position
A11:complement(22896039..22907517)
AA seq 1409 aa
MLPMSSQGTATATKTLALDSTQLYLTAIDSSDSTLSFPSIPSSFPPSKLIPNTRFLVDSF
RHSTTTTFSAAYFLSHFHSDHYSGLSPSWSKGIIFCSHLTSLLLIQTLKIPPHFVFPLPL
NDPVVVDGCEVILVDANHCPGAVQFLFKVPTKNGSFERYVHTGDCRYCNSMKLNSYLNDF
VGCDAIFLDTTYCNPKFVFPSQEESVDYVVSVVDRIGKEFKEKKVLFLVATYVVGKEKIL
VEVARRCKRKIFVDGRKMEILNVLGYGGDKVFTVDESESNVHVVGWNVLGETWPYFRPNF
VRMKEIMEEKGYEKIVGFVPTGWTYEIKRNKFVVRSKDSIEIHLVPYSEHSNYDELREYV
KFLKPKKVIPTVGMDIEKLDSKHADKLRRHFAGLVDEMANKKDFLMGFHRGNYGGVEKVE
MDASPDLNEDKDMERKQNILEMKSVESKNADITLNDSSPVQKPDLQDSAIPNEEERERII
EELGDSLPRWVTRDQKLNLISSSRWNVVEAVSNFYEHENELYEQISAFRTSDSASAAQAG
SSDNSVSSLNSGPFRSSRHEGLISHLSQASKPSNFKLSVRSNISPGKRKKSTENKSNKKV
KSNSKLESSGSKQPMITSFFGKVLVDDSKGGGTGLKIEECPKDEITLPGDLTKSYTEKID
QFIQIINGNESSRNYVATLLEKTQGDINRALDTYYGNPEVNHDGNTENMVFSSKSAQVWS
CSNDCPVSKNENALEESRSTPDSSLQGQPVENVDVTLVSLPPDKYKPIEHACWRSDQPAP
YVHLARTFDLVGSQRGKIKATSMLCNMFRSLLALSPEDVLPAVYLCTNKIAADHENIELN
IGGSLVTSALEEACGTNRSKIRDMYNDMGDLGDVAQACRQTQTLLAPPRPLLIRDVYSVL
RKISVQTGSGSTMRKKNLIVNLIRSCREKEMKFLVRTLVRNLRIGAMMKTVLPALAQAVV
MNSSRALCHEGTADCLKEKLQELSTAVTEAYNVLPNLDLLVPSLMKEGIAFSSSTLSMVP
GIPIKPMLAKITNGVPEVLKLFQNKAFTCEYKYDGQRVQIHKLANGAVRVFSRNGDETTL
RFPDLINTIKESAKPAAQTFILDAEVVAIDRKNGQKLMSFQELSSRERGSKDSLITVDKI
KVNICVFVFDIMFANGQQLLGVPLRQRRKCLKDLFHDEKLGYFEYAKEIIVEADDACLTS
EATFTQISSFLEDALQFSCEGIMVKALDIDAGYLLSKRSDTWLKVKRDYVEGLSDSLDLV
PIGAWHGNGRKAGWYSPFLMACYNPDTEDFQSVCRVMSGFSDSFYKEMKEFYAGDRILAK
KPAYYQTAEVPDMWFSPELIWEIRGADFTVSPVHQAAIGLVHPSRGISIRFPRFIRLVTD
RNPEECSTAADVAEMFHSQTRKMDVTAQR
NT seq 4230 nt   +upstreamnt  +downstreamnt
atgctgccaatgtcatctcaagggacggccaccgccaccaaaacacttgcgttagactcc
acccaactttatctcactgccatagactcctccgattccaccctttcttttccctctatt
ccctcctctttccctccctctaaactcatacccaatacccgattccttgtcgactccttc
cgccactccaccaccaccaccttctccgccgcctacttcctctcccacttccactccgac
cactactccggcctctccccttcctggtccaaaggcatcatcttttgttcccacctcact
tccctcctcctcatccaaacccttaaaatcccgcctcatttcgtcttccctttacctcta
aacgaccccgttgtggtagatggctgcgaggtcattctcgttgacgccaatcattgcccc
ggtgctgtccaattcctattcaaagttcccacaaaaaacgggagctttgaaaggtatgtt
cacacgggtgattgtcgttattgtaattcgatgaagttgaatagttatttgaatgacttt
gttggttgtgatgcgatttttttagatactacttattgtaatccaaaattcgtatttcct
tctcaagaagaatcggttgattatgtagttagtgtggtagataggataggaaaggaattt
aaagaaaaaaaggttttgtttcttgttgccacttatgttgttggaaaagagaagattttg
gttgaggtcgcgaggcgatgtaagaggaagatatttgttgatgggaggaaaatggagatt
ttaaatgttttggggtatgggggtgataaagttttcacggtagatgagagtgagagtaat
gttcatgtcgttggttggaatgtattaggcgagacgtggccgtattttcggccgaatttt
gtgagaatgaaagagattatggaggaaaaagggtatgagaagattgttggctttgtgccg
actgggtggacttatgaaattaaacggaataaatttgtagtgaggtcaaaagattcaatc
gagatacatctagtcccttacagtgagcattctaattatgatgagcttagagaatatgtg
aagtttttgaaaccaaagaaggttattcctactgttggcatggacattgagaagcttgac
agtaagcatgctgataagctgagaaggcactttgctggtctggttgatgaaatggcaaat
aaaaaggacttcctgatgggttttcatcgcggcaactatgggggtgtagaaaaagttgaa
atggatgctagtcctgacttgaatgaggacaaggacatggagagaaagcaaaatatattg
gaaatgaaatctgttgagagtaaaaatgcagatattactttgaatgattcatctcctgtg
cagaaacctgatttacaagattcagctataccgaatgaggaggaaagagagagaatcatt
gaggaattaggtgactctttgcccagatgggtgaccagggaccagaaattaaatttgatc
agcagctcaagatggaatgttgttgaagcagtttctaatttttatgaacatgaaaatgag
ttatacgagcaaatctctgcttttagaacttctgattctgcctctgctgctcaggcaggt
tcatctgacaactctgtctcatctttgaattcagggccttttagaagtagcaggcatgaa
ggtttaatcagtcatttaagtcaagccagcaagccttctaattttaaactttcagttcgg
agtaacatatctcccggtaaaaggaagaaaagtactgagaacaagtcaaataagaaagta
aaaagcaactcaaaactggaatctagcgggtcaaagcaacctatgataactagcttcttt
ggtaaagttttggttgatgactctaaaggtggtgggactggcttgaaaattgaggaatgc
cctaaggatgaaatcacattgcctggtgacttgactaaatcatatacagagaaaatagat
cagtttattcagataataaatggcaatgaatcgtcaagaaattatgtggccaccttactt
gagaagacccaaggagatatcaacagggcactggatacatattatggtaatcctgaagtg
aaccatgatgggaatacggaaaatatggtattttccagcaaatcagctcaggtctggagc
tgtagtaatgattgccctgttagcaagaatgaaaatgcactggaggagtcaagatctact
ccggattcatctttgcaaggacaaccagtggaaaatgttgacgtaactcttgtatcattg
cctcctgataaatataaacccattgagcatgcatgctggaggtctgaccagcctgctcca
tatgtccatcttgcacggacttttgaccttgttggcagtcaaaggggaaagatcaaagct
acttccatgctttgcaatatgtttaggagtttgctggccttatcccctgaggatgtgctt
cctgctgtgtatctgtgcaccaacaaaatcgccgctgatcatgaaaatattgaattgaat
attggcggtagtttggttacatctgcactggaagaagcttgtgggactaaccgttcaaaa
ataagggatatgtacaatgacatgggtgatcttggtgatgttgcacaagcatgccgacaa
acccaaactttacttgctcctccacgaccactattaattagggatgtatattctgtgctt
cggaagataagtgtacaaacaggcagtggcagcaccatgcggaagaaaaaccttattgtg
aatcttatacgttcatgtagagagaaggagatgaagtttctagtgagaactttggtcagg
aatttgcgaataggagcaatgatgaaaactgttcttcctgcattggctcaagcagttgtc
atgaattcctctcgtgctctttgtcatgaagggacagcagattgtctaaaagaaaagctc
caggaactttctacagcagtaaccgaagcatataatgtacttccaaatttggatttgctt
gttccttcactaatgaaggaaggtattgcattttcatcatcaaccttgtcaatggttccg
ggaatacctattaaacccatgcttgcaaaaattaccaatggggttccagaagtactgaag
ctttttcaaaacaaagcttttacatgtgaatataaatatgatggtcagcgtgtccagatt
cacaaattggctaatggagcggtgcgtgtcttttcacgaaatggggatgaaacaacatta
agatttccagatttaattaatacaattaaagaatctgctaagcctgctgcccagactttc
atattggatgctgaggtagttgcaattgataggaagaatggtcagaagctgatgtccttc
caagaattatcttcaagagaaagaggaagcaaagattctttgatcacagtggacaaaata
aaggttaatatttgcgtatttgtgtttgacatcatgtttgctaatggacagcagctgcta
ggtgttcctctacgccaaagaaggaaatgtttgaaggatttgtttcatgatgagaagttg
ggttattttgaatatgcaaaagaaatcatagtggaagcagatgatgcttgtttgaccagt
gaggccacatttactcagataagctcttttcttgaagatgcattgcagttctcatgtgaa
ggaattatggttaaagccttagatattgatgctggataccttctgtcaaaacgtagtgat
acatggttaaaggtgaagcgagactatgtggaaggattaagcgattcccttgatttagtc
ccaattggtgcttggcatggcaatggaagaaaagcgggatggtacagccccttcctcatg
gcatgctacaacccagacactgaagattttcaaagtgtatgtcgtgttatgtctggattc
tctgattcattttacaaagagatgaaagagttctatgcgggggataggatcttagccaaa
aagccagcttactatcaaacagctgaggtgcctgatatgtggttctctccagaacttatt
tgggaaataagaggtgcggacttcaccgtatcaccggttcatcaggctgcgataggatta
gttcatccgtcgcgtggcatctcaataagatttcctaggttcattcgcttggttacagat
cggaaccccgaggaatgtagcacggcagcagatgtagctgaaatgtttcattcgcagact
cgaaagatggatgtgacggcccaacgatga

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