Gossypium hirsutum (upland cotton): 107920208
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Entry
107920208 CDS
T04793
Name
(RefSeq) serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107920208
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107920208
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107920208
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107920208
03041 Spliceosome [BR:
ghi03041
]
107920208
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
107920208
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
107920208
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107920208
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107920208
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107920208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
107920208
NCBI-ProteinID:
XP_016705267
UniProt:
A0A1U8KS22
LinkDB
All DBs
Position
D13:complement(57219817..57223375)
Genome browser
AA seq
342 aa
AA seq
DB search
MDQGLLDDIINRLLEVRGRPGKQVQLSESEIRQLCLVSKEIFLQQPNLLELEAPIKICGD
IHGQYSDLLRLFEYGGLPPDANYLFLGDYVDRGKQSLETICLLLAYKIKHPENFFLLRGN
HECASINRIYGFYDECKRRFNVRLWRTFTECFNCLPVAALIDEKILCMHGGLSPDLNNLD
HIRSLQRPTDVPDTGLLCDLLWSDPSKDVQGWGMNDRGVSFTFGPDKVSEFLQKHDLDLI
CRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPR
FNFGGTATARPGSASASVFGSTTTAKPGNTPAGVKSFLGTRI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagggttactggatgatattataaaccggcttttggaagttaggggtcgacca
gggaaacaagttcagttatctgaatcagagatccggcagctttgtttggtttctaaagag
attttcttacaacaacctaatttgttggaacttgaagcccccatcaagatttgtggtgat
attcatggtcaatattctgatcttttaaggctttttgagtatggtggattgccaccagat
gccaactacttatttttaggggactatgttgatcgaggcaagcaaagtctggagaccata
tgtcttcttcttgcttacaagataaaacaccctgaaaactttttcctcttgaggggtaac
catgaatgtgcttctataaaccgcatatatgggttctatgatgagtgtaagagaagattt
aatgttaggctatggaggacattcacggaatgttttaactgccttccagtggcagcatta
atcgatgagaagattctgtgcatgcatggaggcctttctcccgatctgaataatttggat
catattcgaagtttacaacgcccgactgatgtaccagacacaggtttgctctgtgatctt
ctttggtcagatcccagtaaagatgttcaaggttggggaatgaacgacagaggtgtttca
tttacttttggtcctgacaaagtgtcagagtttttacagaaacatgacctagatctcatt
tgccgtgcccaccaggttgtggaagatggatatgagtttttcgccgaccgacaacttgta
actatattttcagcacccaattattgcggggaattcgataatgcaggagccatgatgagt
gtggatgagactttaatgtgctcctttcaaatattgaagcctgctgataaaaaaccccga
tttaactttgggggcacggccacagccaggcctggtagcgcttctgccagtgtctttggc
agcacgacaacagcaaagcccggaaatactccagcaggagtcaagtcgttccttggcaca
aggatttga
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