KEGG   Gossypium hirsutum (upland cotton): 107925288
Entry
107925288         CDS       T04793                                 
Name
(RefSeq) long chain base biosynthesis protein 1
  KO
K00654  serine palmitoyltransferase [EC:2.3.1.50]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00600  Sphingolipid metabolism
ghi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09103 Lipid metabolism
   00600 Sphingolipid metabolism
    107925288
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ghi01007]
    107925288
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.50  serine C-palmitoyltransferase
     107925288
Amino acid related enzymes [BR:ghi01007]
 Aminotransferase (transaminase)
  Class II
   107925288
SSDB
Motif
Pfam: Aminotran_1_2 OKR_DC_1 Cys_Met_Meta_PP PND
Other DBs
NCBI-GeneID: 107925288
NCBI-ProteinID: XP_016711426
UniProt: A0A1U8L9Z5
LinkDB
Position
A10:complement(201107..209146)
AA seq 482 aa
MELAALNLVNATLNWITFALDAPSARAVVFGVHIGGHLFVEVLLLVVILFLLSQKSYKPP
KRPLTKKEIDELCDEWVPESLIPPITQEMLSEPPVLESAAGPHTIIDGKEVVNFASANYL
GFVGHDKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTHDSILYSYGLS
TLFSAIPCFCKKGDIIVVDEGVHWGIQNGLYLSRSTIVYFKHNDMESLEKTLEKITAQNK
RAKKLRRYIVVESVYQNSGQIAPLDKIIRLKEKYRFRVLLDETNSFGVLGRTGRGLTEYC
GVPIEKIDIVTAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITAI
DILEQNPDLTSKLKENIAILWKGLSDIRGLSIASNPESPIVFLVLEKSTGSLKSDLQLLE
DIADRALKQESIFVVVSKRSTLALDKCPLPVGIRLFVSAAHSESDLLMACESLNRVAAAM
LR
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggaattagctgcattaaacttagttaatgccactttaaattggatcacttttgctttg
gatgccccttctgcacgagctgtggtgtttggagttcacataggcgggcatttatttgtg
gaagttcttcttttggtggtcattctctttctgctttcccagaaaagttacaagcctcct
aagcggccattgacaaagaaggaaatagatgagctctgtgatgaatgggtcccagaatcc
cttattcctcctatcacgcaagagatgctgagtgaacccccagtgttggaaagtgctgca
gggccccatactataatcgatgggaaagaagttgtgaactttgcttctgctaattatctt
ggatttgtagggcatgataaattacttgaatcatgtacttctgcattggagaaatatggt
gttggttcttgtggtcctcgtggattctatggcaccattgatgtccatcttgattgtgag
gccagaatagcaaagtttttgggaacacatgattctatcctctattcttatgggctttcc
accttgttcagtgcaatcccatgtttttgtaaaaagggtgacataattgttgtggatgag
ggagtccattggggaatacaaaatggcctctacctttctagaagcaccattgtttatttc
aagcacaatgatatggaatctctagaaaaaactcttgagaaaattacagcacagaacaag
cgggctaagaaattacggcgctacattgtggttgaatctgtgtatcagaattcaggtcaa
atagctcctttggacaagatcatcaggttgaaagagaagtatcgcttccgtgtcttattg
gatgagaccaactcatttggtgtacttggccgtactggaaggggtctgactgaatactgc
ggggttccgatagagaagatagacattgtcactgctgccatgggacatgcattggcaaca
gaaggaggattctgcactggaagtgctcgagtcattgatcatcaacggttgagcagttct
ggctacgtcttctctgcatctttacccccatatttggctagtgctgcaattactgctatt
gacatcctagagcaaaatcctgatctgacatcaaagctgaaggaaaacattgccatttta
tggaaaggactctccgatatccgggggctttcaatagcaagcaatccagaatcaccgatt
gttttccttgtgcttgaaaaatcaactggttcgctgaaaagtgacctccagctccttgaa
gacattgctgatcgtgccttgaaacaagaatccatttttgtagtggtttcaaaaagatca
actctcgctctcgataaatgcccccttcctgtcgggattagactgtttgtttcagccgcc
cattcagagtccgacctgcttatggcatgtgaatcactcaaccgagtcgcagcagcgatg
cttaggtga

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