Gossypium hirsutum (upland cotton): 107925288
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Entry
107925288 CDS
T04793
Name
(RefSeq) long chain base biosynthesis protein 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00600
Sphingolipid metabolism
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
107925288
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ghi01007
]
107925288
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
107925288
Amino acid related enzymes [BR:
ghi01007
]
Aminotransferase (transaminase)
Class II
107925288
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
PND
Motif
Other DBs
NCBI-GeneID:
107925288
NCBI-ProteinID:
XP_016711426
UniProt:
A0A1U8L9Z5
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Position
A10:complement(201107..209146)
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AA seq
482 aa
AA seq
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MELAALNLVNATLNWITFALDAPSARAVVFGVHIGGHLFVEVLLLVVILFLLSQKSYKPP
KRPLTKKEIDELCDEWVPESLIPPITQEMLSEPPVLESAAGPHTIIDGKEVVNFASANYL
GFVGHDKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTHDSILYSYGLS
TLFSAIPCFCKKGDIIVVDEGVHWGIQNGLYLSRSTIVYFKHNDMESLEKTLEKITAQNK
RAKKLRRYIVVESVYQNSGQIAPLDKIIRLKEKYRFRVLLDETNSFGVLGRTGRGLTEYC
GVPIEKIDIVTAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITAI
DILEQNPDLTSKLKENIAILWKGLSDIRGLSIASNPESPIVFLVLEKSTGSLKSDLQLLE
DIADRALKQESIFVVVSKRSTLALDKCPLPVGIRLFVSAAHSESDLLMACESLNRVAAAM
LR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggaattagctgcattaaacttagttaatgccactttaaattggatcacttttgctttg
gatgccccttctgcacgagctgtggtgtttggagttcacataggcgggcatttatttgtg
gaagttcttcttttggtggtcattctctttctgctttcccagaaaagttacaagcctcct
aagcggccattgacaaagaaggaaatagatgagctctgtgatgaatgggtcccagaatcc
cttattcctcctatcacgcaagagatgctgagtgaacccccagtgttggaaagtgctgca
gggccccatactataatcgatgggaaagaagttgtgaactttgcttctgctaattatctt
ggatttgtagggcatgataaattacttgaatcatgtacttctgcattggagaaatatggt
gttggttcttgtggtcctcgtggattctatggcaccattgatgtccatcttgattgtgag
gccagaatagcaaagtttttgggaacacatgattctatcctctattcttatgggctttcc
accttgttcagtgcaatcccatgtttttgtaaaaagggtgacataattgttgtggatgag
ggagtccattggggaatacaaaatggcctctacctttctagaagcaccattgtttatttc
aagcacaatgatatggaatctctagaaaaaactcttgagaaaattacagcacagaacaag
cgggctaagaaattacggcgctacattgtggttgaatctgtgtatcagaattcaggtcaa
atagctcctttggacaagatcatcaggttgaaagagaagtatcgcttccgtgtcttattg
gatgagaccaactcatttggtgtacttggccgtactggaaggggtctgactgaatactgc
ggggttccgatagagaagatagacattgtcactgctgccatgggacatgcattggcaaca
gaaggaggattctgcactggaagtgctcgagtcattgatcatcaacggttgagcagttct
ggctacgtcttctctgcatctttacccccatatttggctagtgctgcaattactgctatt
gacatcctagagcaaaatcctgatctgacatcaaagctgaaggaaaacattgccatttta
tggaaaggactctccgatatccgggggctttcaatagcaagcaatccagaatcaccgatt
gttttccttgtgcttgaaaaatcaactggttcgctgaaaagtgacctccagctccttgaa
gacattgctgatcgtgccttgaaacaagaatccatttttgtagtggtttcaaaaagatca
actctcgctctcgataaatgcccccttcctgtcgggattagactgtttgtttcagccgcc
cattcagagtccgacctgcttatggcatgtgaatcactcaaccgagtcgcagcagcgatg
cttaggtga
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